RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF846Q147U1 533 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 ZNF79Q15937 498 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 SRSF7Q16629 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
COPS3-215ENST00000578317 DEFB113Q30KQ7 82 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 FAM131AQ6UXB0 335 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 C17orf107Q6ZR85 190 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 SLC36A1Q7Z2H8 476 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 C6orf201Q7Z4U5 140 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 BOLLQ8N9W6 283 aaKnown RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 SUMF2Q8NBJ7 301 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 OR4M2Q8NGB6 313 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 OR5T2Q8NGG2 359 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 NRGNQ92686 78 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 TMEM246Q9BRR3 403 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 FAAP24Q9BTP7 215 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 DPCDQ9BVM2 203 aaPredicted RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 PECRQ9BY49 303 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 WDR12Q9GZL7 423 aaKnown RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 ZNF581Q9P0T4 197 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 IGHV3OR15-7A0A075B7D8 119 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 TRBV6-6A0A0A6YYG2 114 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 VWC2LB2RUY7 222 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 GABARAPH6UMI1 98 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 H7C1Q1 480 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 MGST3O14880 152 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 NAPSAO96009 420 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 GYPAP02724 150 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 TK1P04183 234 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 WNT2P09544 360 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 PRSS3P35030 304 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 RBMXP38159 391 aaKnown RBP6.65□□□□□ -1.34
COPS3-215ENST00000578317 GABRA2P47869 451 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 SSBP1Q04837 148 aaKnown RBP6.65□□□□□ -1.34
COPS3-215ENST00000578317 SCN1BQ07699 218 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 IL18Q14116 193 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 TMEM95Q3KNT9 176 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 PAN3Q58A45 887 aaKnown RBP6.65□□□□□ -1.34
COPS3-215ENST00000578317 ATAD3CQ5T2N8 411 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 SPICQ8N5J4 248 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 ZNF525Q8N782 197 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 C19orf18Q8NEA5 215 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 GPX8Q8TED1 209 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 C10orf105Q8TEF2 133 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 LURAP1Q96LR2 239 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 GAFA1Q96PS6 74 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 CCL13Q99616 98 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 SULT4A1Q9BR01 284 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 SRRQ9GZT4 340 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 ZMAT3Q9HA38 289 aaKnown RBP6.65□□□□□ -1.34
COPS3-215ENST00000578317 MIOXQ9UGB7 285 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 OR14J1Q9UGF5 321 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 RBMX2Q9Y388 322 aaKnown RBP6.65□□□□□ -1.34
COPS3-215ENST00000578317 CACNA1DQ01668 2161 aa6.65□□□□□ -1.34
COPS3-215ENST00000578317 FUOMA2VDF0 154 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 TMEM235A6NFC5 223 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 CEACAM18A8MTB9 384 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 MT-ND4P03905 459 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 DTYMKP23919 212 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 CBX5P45973 191 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 OR3A1P47881 315 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 SNU13P55769 128 aaKnown RBP6.65□□□□□ -1.35
COPS3-215ENST00000578317 SLC35E4Q6ICL7 350 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 ZNF880Q6PDB4 577 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 CLEC2AQ6UVW9 174 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 ZNF841Q6ZN19 808 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 ZNF497Q6ZNH5 498 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 Q6ZS49 121 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 IZUMO1Q8IYV9 350 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 OR8H2Q8N162 312 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 Q8N402 240 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 BPIFB2Q8N4F0 458 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 STPG3Q8N7X2 389 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 ZNRF1Q8ND25 227 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 SMIM4Q8WVI0 70 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 FCAMRQ8WWV6 532 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 FAM168AQ92567 244 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 PERPQ96FX8 193 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 SDHCQ99643 169 aaPredicted RBP6.65□□□□□ -1.35
COPS3-215ENST00000578317 CCDC32Q9BV29 185 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 CHST6Q9GZX3 395 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 MTFP1Q9UDX5 166 aa6.65□□□□□ -1.35
COPS3-215ENST00000578317 ZNF107Q9UII5 783 aaPredicted RBP6.65□□□□□ -1.35
COPS3-215ENST00000578317 NOTCH2Q04721 2471 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 DSCAMO60469 2012 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 NKX6-3A6NJ46 265 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 F5H0A9 414 aaPredicted RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 SIRPB1O00241 398 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 ADAM20O43506 726 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 SSX5O60225 188 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 RBBP9O75884 186 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 LY86O95711 162 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 CD3GP09693 182 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 GZMHP20718 246 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 CEBPDP49716 269 aaPredicted RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 NPY4RP50391 375 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 GNG2P59768 71 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 PYDC2Q56P42 97 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 LRRC10Q5BKY1 277 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 OLFML2AQ68BL7 652 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 LYPD2Q6UXB3 125 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms