RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A8PA6NJQ4 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A22PA8MWA6 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 SLC22A1O15245 554 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 KCNAB3O43448 404 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 MGMTP16455 207 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 CALRP27797 417 aaKnown RBP10.38□□□□□ -0.75
CCDC57-211ENST00000578187 PSMB9P28065 219 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 TAF9Q16594 264 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 MIDNQ504T8 468 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 RSBN1Q5VWQ0 802 aaPredicted RBP10.38□□□□□ -0.75
CCDC57-211ENST00000578187 ZNF782Q6ZMW2 699 aaPredicted RBP10.38□□□□□ -0.75
CCDC57-211ENST00000578187 TRAPPC6BQ86SZ2 158 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 TMEM104Q8NE00 496 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 LINC01006Q8NI28 216 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 PLPPR1Q8TBJ4 325 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 Q96M66 194 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 DPCDQ9BVM2 203 aaPredicted RBP10.38□□□□□ -0.75
CCDC57-211ENST00000578187 CST11Q9H112 138 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 TAS2R3Q9NYW6 316 aa10.38□□□□□ -0.75
CCDC57-211ENST00000578187 A0A1W2PRD5 423 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 A0A1W2PRF3 423 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 A0A1W2PRM7 423 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 ODF3BA8MYP8 253 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 SLC17A2O00624 439 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 COX7A1P24310 79 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 HTR2CP28335 458 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 SRSF4Q08170 494 aaKnown RBP10.37□□□□□ -0.75
CCDC57-211ENST00000578187 PDLIM3Q53GG5 364 aaPredicted RBP10.37□□□□□ -0.75
CCDC57-211ENST00000578187 HEPN1Q6WQI6 88 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 OR11H6Q8NGC7 330 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 AJUBAQ96IF1 538 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 SELENOIQ9C0D9 397 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 BANF2Q9H503 90 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 OR6C3Q9NZP0 311 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 KIF25Q9UIL4 384 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 SESN1Q9Y6P5 492 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 MEGF8Q7Z7M0 2845 aa10.37□□□□□ -0.75
CCDC57-211ENST00000578187 TRAV1-2A0A0B4J238 106 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 ZNF729A6NN14 1252 aaPredicted RBP10.36□□□□□ -0.75
CCDC57-211ENST00000578187 CRTAPO75718 401 aaPredicted RBP10.36□□□□□ -0.75
CCDC57-211ENST00000578187 BPNT1O95861 308 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 QRFPP83859 136 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 UNC119Q13432 240 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 ATAD3CQ5T2N8 411 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
CCDC57-211ENST00000578187 ZNF626Q68DY1 528 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 SLC35E4Q6ICL7 350 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 DTX3Q8N9I9 347 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 OR13A1Q8NGR1 328 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 OR13D1Q8NGV5 346 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 FAM46BQ96A09 425 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 BARHL1Q9BZE3 327 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 TMEM133Q9H2Q1 129 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 C16orf95Q9H693 158 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 RAB18Q9NP72 206 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 ING3Q9NXR8 418 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
CCDC57-211ENST00000578187 AK6Q9Y3D8 172 aaKnown RBP10.36□□□□□ -0.75
CCDC57-211ENST00000578187 MEIKINA0A087WXM9 373 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 TMEM14DPA8MWL7 114 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 MMP23AO75900 390 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 TNFAIP8O95379 198 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 CGB3P0DN86 165 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 CGB7P0DN87 165 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 MYL9P24844 172 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 CDK2P24941 298 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 FGF9P31371 208 aaPredicted RBP10.35□□□□□ -0.75
CCDC57-211ENST00000578187 GLP1RP43220 463 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 PROK1P58294 105 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 C17orf58Q2M2W7 97 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 C2orf68Q2NKX9 166 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 PRAMEF5Q5TYX0 476 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 SIGIRRQ6IA17 410 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 OR10K2Q6IF99 312 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 Q6ZSV7 163 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 BEND2Q8NDZ0 799 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 KCNG3Q8TAE7 436 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 TM2D1Q9BX74 207 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 TMEM59Q9BXS4 323 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 KCNK15Q9H427 330 aa10.35□□□□□ -0.75
CCDC57-211ENST00000578187 LINC00574Q9H8X3 128 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms