RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 NOL3O60936 208 aaKnown RBP9.03□□□□□ -0.96
CHD3-216ENST00000573936 PDCD6O75340 191 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 CCL3L1P16619 93 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 DLX6P56179 175 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 RPS27AP62979 156 aaKnown RBP9.03□□□□□ -0.96
CHD3-216ENST00000573936 QRFPP83859 136 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 P2RY14Q15391 338 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 C2orf76Q3KRA6 126 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 RSBN1Q5VWQ0 802 aaPredicted RBP9.03□□□□□ -0.96
CHD3-216ENST00000573936 OR52W1Q6IF63 320 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 C11orf42Q8N5U0 333 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 OR51D1Q8NGF3 324 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 OR13D1Q8NGV5 346 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 NEK7Q8TDX7 302 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 FAM46BQ96A09 425 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 FAM3DQ96BQ1 224 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 COQ2Q96H96 371 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 SLC6A7Q99884 636 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 TM2D1Q9BX74 207 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 BATF3Q9NR55 127 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 ING3Q9NXR8 418 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 RCC2Q9P258 522 aaKnown RBP9.03□□□□□ -0.96
CHD3-216ENST00000573936 FBLN5Q9UBX5 448 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 RAB22AQ9UL26 194 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 PEX16Q9Y5Y5 336 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 TMEM30CPA0ZSE6 113 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 RNASEK-C17orf49H0YIS7 233 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 ZNF701M0R085 212 aaPredicted RBP9.02□□□□□ -0.97
CHD3-216ENST00000573936 AIPO00170 330 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 WIPF1O43516 503 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 TMEM127O75204 238 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 CA11O75493 328 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 CLEC2LP0C7M8 214 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 IGHV1-8P0DP01 117 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 GZMHP20718 246 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 SDC2P34741 201 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 OR10A3P58181 314 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 UNC119Q13432 240 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 SPCS2Q15005 226 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 HES5Q5TA89 166 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 OR10K2Q6IF99 312 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 RAB12Q6IQ22 244 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 TCF23Q7RTU1 214 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 NDNFQ8TB73 568 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 C22orf15Q8WYQ4 148 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 RAB9BQ9NP90 201 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 ETAA1Q9NY74 926 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 RSL24D1Q9UHA3 163 aaKnown RBP9.02□□□□□ -0.97
CHD3-216ENST00000573936 KIF25Q9UIL4 384 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 SESN1Q9Y6P5 492 aa9.02□□□□□ -0.97
CHD3-216ENST00000573936 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 SMIM30A4D0T7 59 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 NPFFO15130 113 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 CLPXO76031 633 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 RAB6AP20340 208 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 GLP1RP43220 463 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 SERPINB10P48595 397 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 LGALS4P56470 323 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 CLDN12P56749 244 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 HILS1P60008 231 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 MXD1Q05195 221 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 KLRD1Q13241 179 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 MIDNQ504T8 468 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 RUSC1-AS1Q66K80 236 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 BRICD5Q6PL45 260 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 HEPN1Q6WQI6 88 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 NR2C2APQ86WQ0 139 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 CROCCP3Q8IVE0 287 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 PDZD9Q8IXQ8 264 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
CHD3-216ENST00000573936 FAM89BQ8N5H3 189 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 OR10A7Q8NGE5 316 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 OR56B1Q8NGI3 324 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 PLPPR1Q8TBJ4 325 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 PTX4Q96A99 478 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 DGCR14Q96DF8 476 aaKnown RBP9.01□□□□□ -0.97
CHD3-216ENST00000573936 LPAR5Q9H1C0 372 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 PRDM13Q9H4Q3 707 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 ZMAT3Q9HA38 289 aaKnown RBP9.01□□□□□ -0.97
CHD3-216ENST00000573936 ZNF581Q9P0T4 197 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 FAM96BQ9Y3D0 163 aa9.01□□□□□ -0.97
CHD3-216ENST00000573936 TMEM272A0A1B0GTI8 110 aa9□□□□□ -0.97
CHD3-216ENST00000573936 KBTBD11-OT1A0A1B0GTJ5 212 aa9□□□□□ -0.97
CHD3-216ENST00000573936 METTL21EPA6NDL7 271 aa9□□□□□ -0.97
CHD3-216ENST00000573936 TRIM77I1YAP6 450 aa9□□□□□ -0.97
CHD3-216ENST00000573936 LDLRAD4O15165 306 aa9□□□□□ -0.97
CHD3-216ENST00000573936 IL1AP01583 271 aa9□□□□□ -0.97
CHD3-216ENST00000573936 MT-ND4P03905 459 aa9□□□□□ -0.97
CHD3-216ENST00000573936 FBP1P09467 338 aa9□□□□□ -0.97
CHD3-216ENST00000573936 CGB3P0DN86 165 aa9□□□□□ -0.97
CHD3-216ENST00000573936 CGB7P0DN87 165 aa9□□□□□ -0.97
CHD3-216ENST00000573936 CDK2P24941 298 aa9□□□□□ -0.97
CHD3-216ENST00000573936 CHATP28329 748 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms