RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 OCM2P0CE71 109 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 OCMP0CE72 109 aaPredicted RBP12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 UBCP0CG48 685 aaKnown RBP12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 LIMS3P0CW19 117 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 LIMS4P0CW20 117 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 ZNF20P17024 532 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 ATF1P18846 271 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 PDZK1IP1Q13113 114 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 HNF4GQ14541 408 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 DEFB136Q30KP8 78 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 KLHL22Q53GT1 634 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 OR2G6Q5TZ20 316 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 SETD9Q8NE22 299 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 OR9G1Q8NH87 305 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 LEAP2Q969E1 77 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 RAX2Q96IS3 184 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 KIRREL1Q96J84 757 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 SPACA5Q96QH8 159 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 NEK6Q9HC98 313 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 FGF20Q9NP95 211 aaPredicted RBP12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 C8orf4Q9NR00 106 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 PCDHB16Q9NRJ7 776 aa12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 MRPS18AQ9NVS2 196 aaKnown RBP12.67□□□□□ -0.38
HCFC1R1-203ENST00000572355 A0A1W2PPI3 338 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 OR4C45A6NMZ5 311 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 CCL24O00175 119 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 HSPB6O14558 160 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 CSN2P05814 226 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 PRKACBP22694 351 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 GNG10P50151 68 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 ALKBH1Q13686 389 aaKnown RBP12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 KCTD20Q7Z5Y7 419 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 FOXRED2Q8IWF2 684 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 STPG2Q8N412 459 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 BPIFB6Q8NFQ5 453 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 FGGYQ96C11 551 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 OPALINQ96PE5 141 aa12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
HCFC1R1-203ENST00000572355 C3orf84H3BNL1 204 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 SLC33A1O00400 549 aaPredicted RBP12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 FGF16O43320 207 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 KDM4BO94953 1096 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 IGKV1D-33P01593 117 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 IGKV1-33P01594 117 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 GP2P55259 537 aaKnown RBP12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 DIAPH2-AS1Q14236 149 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 LTC4SQ16873 150 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 UTS2BQ765I0 119 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 COMMD1Q8N668 190 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 SPSB1Q96BD6 273 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 PDCD1LG2Q9BQ51 273 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 OR6C3Q9NZP0 311 aa12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 SIRT4Q9Y6E7 314 aaPredicted RBP12.65□□□□□ -0.38
HCFC1R1-203ENST00000572355 KBTBD11-OT1A0A1B0GTJ5 212 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 J3QR06 171 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 IGHG2P01859 326 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 ECI1P42126 302 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 GBX2P52951 348 aaPredicted RBP12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 MADCAM1Q13477 382 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 TMEM244Q5VVB8 128 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 Q6P435 159 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 SYS1Q8N2H4 156 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 TMEM80Q96HE8 168 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 VCXQ9H320 206 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 CALYQ9NYX4 217 aa12.64□□□□□ -0.39
HCFC1R1-203ENST00000572355 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 DEGS1O15121 323 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 LALBAP00709 142 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 DCKP27707 260 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 ST3GAL4Q11206 333 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 DOC2BQ14184 412 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 AHSA2Q719I0 299 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 OR13A1Q8NGR1 328 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 OR13C3Q8NGS6 347 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 OR8U1Q8NH10 309 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 KIF25Q9UIL4 384 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 PSG11Q9UQ72 335 aa12.63□□□□□ -0.39
HCFC1R1-203ENST00000572355 MEIKINA0A087WXM9 373 aa12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 SEC14L6B5MCN3 397 aa12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 ZFPL1O95159 310 aa12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 C21orf33P30042 268 aaPredicted RBP12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 SOX2P48431 317 aa12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 RAB7AP51149 207 aa12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 CCR9P51686 369 aa12.62□□□□□ -0.39
HCFC1R1-203ENST00000572355 CDK5R1Q15078 307 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms