RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MS4A15Q8N5U1 240 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 GCSAMQ8N6F7 178 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 MINDY2Q8NBR6 621 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 NOXO1Q8NFA2 376 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 OR5D13Q8NGL4 314 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 OR2T4Q8NH00 348 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 CHPT1Q8WUD6 406 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 ZNRF4Q8WWF5 429 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 RASD2Q96D21 266 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 PGLYRP3Q96LB9 341 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 NMNAT3Q96T66 252 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 ALG12Q9BV10 488 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 MRPL13Q9BYD1 178 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 MROQ9BYG7 248 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 BARHL1Q9BZE3 327 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 NUAK2Q9H093 628 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 TXNIPQ9H3M7 391 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 EXOSC4Q9NPD3 245 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 INIPQ9NRY2 104 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 ZFP57Q9NU63 452 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 VSX1Q9NZR4 365 aaPredicted RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 TRAV1-2A0A0B4J238 106 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 A0A1B0GVG6 124 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 A0A1B0GWJ7 208 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 A6NIZ1 184 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 FAM90A8PA6NJQ4 464 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 CENPBD1B2RD01 187 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 LOC110117498-PIK3R3F6TDL0 507 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 J3QRK9 145 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 CTDSP2O14595 271 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 CDRT1O95170 752 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 RENP00797 406 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 GYPBP06028 91 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 COX5BP10606 129 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SELLP14151 372 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 GP9P14770 177 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SPNP16150 400 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.54
CHD3-213ENST00000571249 TNFSF8P32971 234 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 S100A5P33763 92 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SDC2P34741 201 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 ZNF133P52736 654 aaPredicted RBP5.4□□□□□ -1.54
CHD3-213ENST00000571249 OR12D2P58182 307 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 RAP1BP61224 184 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 RPS7P62081 194 aaKnown RBP5.4□□□□□ -1.54
CHD3-213ENST00000571249 RAP1AP62834 184 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 IFITM3Q01628 133 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 FMODQ06828 376 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 FHL3Q13643 280 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SSX2Q16385 188 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SRSF7Q16629 238 aaKnown RBP eCLIP5.4□□□□□ -1.54
CHD3-213ENST00000571249 PCK2Q16822 640 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 DEFB136Q30KP8 78 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 C2orf76Q3KRA6 126 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 ABCA11PQ4W5N1 156 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 LRRC10Q5BKY1 277 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 LGALS9CQ6DKI2 356 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 C22orf42Q6IC83 251 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 RAB12Q6IQ22 244 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 PLEKHG7Q6ZR37 379 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 LINC00336Q6ZUF6 198 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SSX6Q7RTT6 188 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SLC36A1Q7Z2H8 476 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 OR10H4Q8NGA5 316 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SLC7A6Q92536 515 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 OTULINQ96BN8 352 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SAT2Q96F10 170 aaPredicted RBP5.4□□□□□ -1.54
CHD3-213ENST00000571249 PELI1Q96FA3 418 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 PGAM5Q96HS1 289 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 C4orf36Q96KX1 117 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 SOSTQ9BQB4 213 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 ZCCHC4Q9H5U6 513 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 WDR76Q9H967 626 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 C19orf73Q9NVV2 129 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 ETAA1Q9NY74 926 aa5.4□□□□□ -1.54
CHD3-213ENST00000571249 UBE2J1Q9Y385 318 aaPredicted RBP5.4□□□□□ -1.54
CHD3-213ENST00000571249 ZNF320A2RRD8 509 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 PRSS37A4D1T9 235 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 E9PI62 339 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 J3QLW9 94 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 DCTN6O00399 190 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 SELENOFO60613 162 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 RHBDL1O75783 438 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 UPK1BO75841 260 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 GATBO75879 557 aaKnown RBP5.39□□□□□ -1.55
CHD3-213ENST00000571249 SERPINA3P01011 423 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 MRPL3P09001 348 aaKnown RBP5.39□□□□□ -1.55
CHD3-213ENST00000571249 ZNF19P17023 458 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 ALOX5APP20292 161 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 INSL3P51460 131 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 GBX2P52951 348 aaPredicted RBP5.39□□□□□ -1.55
CHD3-213ENST00000571249 ENDOGQ14249 297 aaKnown RBP5.39□□□□□ -1.55
CHD3-213ENST00000571249 OXA1LQ15070 435 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 CDK5R1Q15078 307 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 OR8G1Q15617 311 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 MICBQ29980 383 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 RGS21Q2M5E4 152 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 TEX30Q5JUR7 227 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms