RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 UTS2BQ765I0 119 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 RTN4RL2Q86UN3 420 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 ANKRD13BQ86YJ7 626 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 ZNF596Q8TC21 504 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 WIPF2Q8TF74 440 aaPredicted RBP10.54□□□□□ -0.72
SPG7-221ENST00000569720 CPNE2Q96FN4 548 aaPredicted RBP10.54□□□□□ -0.72
SPG7-221ENST00000569720 EXOSC4Q9NPD3 245 aaKnown RBP10.54□□□□□ -0.72
SPG7-221ENST00000569720 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 IL36RNQ9UBH0 155 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 CKLFQ9UBR5 152 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 STUB1Q9UNE7 303 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 DHDHQ9UQ10 334 aa10.54□□□□□ -0.72
SPG7-221ENST00000569720 SMIM31A0A1B0GVY4 71 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 FAM90A22PA8MWA6 464 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 SIRPB1O00241 398 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 PSPNO60542 156 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 PF4V1P10720 104 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 CD36P16671 472 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 ATF1P18846 271 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 CD33P20138 364 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 TMBIM6P55061 237 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 LOXL3P58215 753 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 ACSM3Q53FZ2 586 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 RDH10Q8IZV5 341 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 ABHD12Q8N2K0 398 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 OR5AU1Q8NGC0 362 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 OR4P4Q8NGL7 312 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 OR13C3Q8NGS6 347 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 SPSB1Q96BD6 273 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 FGGYQ96C11 551 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 YIPF6Q96EC8 236 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 ADAT3Q96EY9 351 aaPredicted RBP10.53□□□□□ -0.72
SPG7-221ENST00000569720 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 LIN7BQ9HAP6 207 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
SPG7-221ENST00000569720 SIRT4Q9Y6E7 314 aaPredicted RBP10.53□□□□□ -0.72
SPG7-221ENST00000569720 TRAV1-2A0A0B4J238 106 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 IGKV1-9A0A0C4DH69 117 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 LEUTXA8MZ59 168 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 TOR1AO14656 332 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 CALCBP10092 127 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 FSTP19883 344 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 CEACAM3P40198 252 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 OR3A1P47881 315 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 RPS11P62280 158 aaKnown RBP eCLIP10.52□□□□□ -0.73
SPG7-221ENST00000569720 PDZK1IP1Q13113 114 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 DOC2BQ14184 412 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 SSX1Q16384 188 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 TMEM95Q3KNT9 176 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 HEPN1Q6WQI6 88 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 Q6ZS46 218 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 CENPVQ7Z7K6 275 aaPredicted RBP10.52□□□□□ -0.73
SPG7-221ENST00000569720 TPRA1Q86W33 373 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 RAB2BQ8WUD1 216 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 TSEN15Q8WW01 171 aaKnown RBP10.52□□□□□ -0.73
SPG7-221ENST00000569720 CREB3L1Q96BA8 519 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 PHF21AQ96BD5 680 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 OCSTAMPQ9BR26 566 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 RHOFQ9HBH0 211 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 TAS2R3Q9NYW6 316 aa10.52□□□□□ -0.73
SPG7-221ENST00000569720 TRBV5-7A0A0A0MS05 114 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 NOL3O60936 208 aaKnown RBP10.51□□□□□ -0.73
SPG7-221ENST00000569720 MMP23AO75900 390 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 OR2H2O95918 312 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 UCHL1P09936 223 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 ZNF44P15621 663 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 CDK2P24941 298 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 CD83Q01151 205 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 PRAMEF5Q5TYX0 476 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 CROCCP3Q8IVE0 287 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 OR4D6Q8NGJ1 314 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 CORO2AQ92828 525 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 TMEM106AQ96A25 262 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 RFT1Q96AA3 541 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 SLC25A33Q9BSK2 321 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 TMED9Q9BVK6 235 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 ZCCHC4Q9H5U6 513 aa10.51□□□□□ -0.73
SPG7-221ENST00000569720 AURKAIP1Q9NWT8 199 aaPredicted RBP10.51□□□□□ -0.73
SPG7-221ENST00000569720 TSSC4Q9Y5U2 329 aaPredicted RBP10.51□□□□□ -0.73
SPG7-221ENST00000569720 TCRBV4S1A1TA0A5B7 111 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 GABRPO00591 440 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 PDCD5O14737 125 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 MAGEB3O15480 346 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 AIREO43918 545 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 KDM4BO94953 1096 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 OR2F2O95006 317 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 PF4P02776 101 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 SRMP19623 302 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 CD24P25063 80 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 LMO1P25800 156 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 PTGFRP43088 359 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 PRRX1P54821 245 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 PPP3R1P63098 170 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 SCN1BQ07699 218 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 AESQ08117 197 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 HSD17B12Q53GQ0 312 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 CCDC144NLQ6NUI1 221 aa10.5□□□□□ -0.73
SPG7-221ENST00000569720 ZNF529Q6P280 563 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms