RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	TRIM45	Q9H8W5	580 aa	Predicted RBP	0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	WDR54	Q9H977	334 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	ASCL3	Q9NQ33	180 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	IFT46	Q9NQC8	304 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	DAZ1	Q9NQZ3	744 aa	Known RBP	0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	COMMD9	Q9P000	198 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	FBXL3	Q9UKT7	428 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	PUS1	Q9Y606	427 aa	Known RBP eCLIP	0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	PTPRK	Q15262	1439 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	SPATA31E1	Q6ZUB1	1445 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	MYO5B	Q9ULV0	1848 aa		0.96	□□□□□ -2.26
BBS4-215	ENST00000569001	ZBED9	Q6R2W3	1325 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	SORL1	Q92673	2214 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	IGKV1OR2-108	A0A075B7D4	117 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	IGHV1-45	A0A0A0MS14	117 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	TRAV8-2	A0A0B4J237	113 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	OR6C70	A6NIJ9	312 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	TRPC5OS	A6NMA1	111 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	LEUTX	A8MZ59	168 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001		C9J4A7	227 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	C8orf87	E5RJ46	101 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001		H3BQ85	93 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	GOLGA8R	I6L899	631 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001		M0QXV9	152 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	ITGB1BP1	O14713	200 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	CYTH3	O43739	400 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	ENSA	O43768	121 aa	Known RBP	0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	CALU	O43852	315 aa	Predicted RBP	0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	PSIP1	O75475	530 aa	Known RBP	0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	TNFAIP8	O95379	198 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	NRAS	P01111	189 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	HRAS	P01112	189 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	KRAS	P01116	189 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	PDYN	P01213	254 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	IGKV5-2	P06315	115 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	SCGB1C2	P0DMR2	95 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	GTF2F2	P13984	249 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	M6PR	P20645	277 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	INPP1	P49441	399 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF83	P51522	516 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	RHOA	P61586	193 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	MGAT3	Q09327	533 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	PMS2P3	Q13401	168 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	RAB31	Q13636	194 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	CASP8	Q14790	479 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	ZCWPW2	Q504Y3	356 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	TTMP	Q5BVD1	217 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	DGAT2L6	Q6ZPD8	337 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001		Q6ZQT7	251 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	USP50	Q70EL3	339 aa	Predicted RBP	0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	CRLF3	Q8IUI8	442 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	MUC15	Q8N387	334 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	OR52E4	Q8NGH9	312 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	OR8S1	Q8NH09	359 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	SCGB1C1	Q8TD33	95 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	CLDN23	Q96B33	292 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	CCDC127	Q96BQ5	260 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	MRAP2	Q96G30	205 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	FAM210A	Q96ND0	272 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	B9D2	Q9BPU9	175 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	PRSS27	Q9BQR3	290 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	SEC22C	Q9BRL7	303 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	FAAP24	Q9BTP7	215 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	SLC25A31	Q9H0C2	315 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	HDHD2	Q9H0R4	259 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	UBQLN4	Q9NRR5	601 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	TAS2R1	Q9NYW7	299 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	TRAPPC1	Q9Y5R8	145 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	PRR14L	Q5THK1	2151 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	MAP3K5	Q99683	1374 aa		0.95	□□□□□ -2.26
BBS4-215	ENST00000569001	ZSWIM8	A7E2V4	1837 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	IGHV3OR15-7	A0A075B7D8	119 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	SDHAF1	A6NFY7	115 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	C4orf51	C9J302	202 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001		F5H5K5	113 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001		F5H5P2	479 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001		J3QLI3	93 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001		K7ERS5	55 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	SULT1C2	O00338	296 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ISLR	O14498	428 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	TOR1A	O14656	332 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	LIN7A	O14910	233 aa	Predicted RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	RGS5	O15539	181 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	FGF16	O43320	207 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ENTPD6	O75354	484 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	NDUFS6	O75380	124 aa	Known RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	SNAP29	O95721	258 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	RAB36	O95755	333 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	IGHV3-53	P01767	116 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ORM1	P02763	201 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	OCM	P0CE72	109 aa	Predicted RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CGB3	P0DN86	165 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CGB7	P0DN87	165 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	MLN	P12872	115 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	AKR1C4	P17516	323 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ATF1	P18846	271 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	SYT1	P21579	422 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CBX5	P45973	191 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ACOT2	P49753	483 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	RPL14	P50914	215 aa	Known RBP	0.94	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms