RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PLEKHJ1Q9NW61 149 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 ING3Q9NXR8 418 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 ETAA1Q9NY74 926 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 KIF25Q9UIL4 384 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 ETV7Q9Y603 341 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 C17orf98A8MV24 154 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 LDLRAD4O15165 306 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 SLC2A2P11168 524 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-208ENST00000567250 CHATP28329 748 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 BLVRBP30043 206 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-208ENST00000567250 VEGFCP49767 419 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 RIPPLY3P57055 190 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 VBP1P61758 197 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 NCS1P62166 190 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 MRPS15P82914 257 aaKnown RBP9.99□□□□□ -0.81
SF3B3-208ENST00000567250 IDNKQ5T6J7 187 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 TRAT1Q6PIZ9 186 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF497Q6ZNH5 498 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 USP43Q70EL4 1123 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 Q8N7P7 452 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 LGALS14Q8TCE9 139 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 CORO2AQ92828 525 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 PHF21AQ96BD5 680 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 NICN1Q9BSH3 213 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 HEXA-AS1Q9H8Q6 139 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 ABRACLQ9P1F3 81 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 HSF4Q9ULV5 492 aa9.99□□□□□ -0.81
SF3B3-208ENST00000567250 SETD2Q9BYW2 2564 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-208ENST00000567250 CLEC2LP0C7M8 214 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 IGHV1-8P0DP01 117 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-208ENST00000567250 TGFBR1P36897 503 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 DLX6P56179 175 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 CTF1Q16619 201 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 KLF17Q5JT82 389 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-208ENST00000567250 C6orf183Q5T699 404 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 SIGIRRQ6IA17 410 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 SLC16A12Q6ZSM3 486 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 C9orf139Q6ZV77 190 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 CLVS1Q8IUQ0 354 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-208ENST00000567250 FAM89BQ8N5H3 189 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 OR13D1Q8NGV5 346 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 SLC25A46Q96AG3 418 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF581Q9P0T4 197 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 TRAPPC2LQ9UL33 140 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 SESN1Q9Y6P5 492 aa9.98□□□□□ -0.81
SF3B3-208ENST00000567250 A0A0B4J203 849 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 IGHV1-69DA0A0B4J2H0 117 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 KBTBD11-OT1A0A1B0GTJ5 212 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 UBE2QL1A1L167 161 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 IGHV1-69P01742 117 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 UBE2E1P51965 193 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 TMBIM6P55061 237 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 TMEM30BQ3MIR4 351 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 HEPN1Q6WQI6 88 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 RBMS3Q6XE24 437 aaKnown RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF782Q6ZMW2 699 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 Q6ZTK2 550 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 C6orf201Q7Z4U5 140 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF554Q86TJ5 538 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 OR10A7Q8NGE5 316 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 OR13A1Q8NGR1 328 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 MRGPRDQ8TDS7 321 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF418Q8TF45 676 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 AP3S1Q92572 193 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 TNFRSF14Q92956 283 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 RAB3CQ96E17 227 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 JMJD8Q96S16 334 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 SUCNR1Q9BXA5 334 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 NAA50Q9GZZ1 169 aaKnown RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 ATG5Q9H1Y0 275 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 RIMS4Q9H426 269 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 CHMP1AQ9HD42 196 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-208ENST00000567250 CALYQ9NYX4 217 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 MGAT4AQ9UM21 535 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
SF3B3-208ENST00000567250 IGHV3OR16-10A0A075B7F0 116 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 A0A0A6YYD4 124 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 MEX3AA1L020 520 aaKnown RBP9.96□□□□□ -0.82
SF3B3-208ENST00000567250 POM121CA8CG34 1229 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 SERPINE3A8MV23 424 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 RNASEK-C17orf49H0YIS7 233 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 SOCS1O15524 211 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 ORC5O43913 435 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 GZMHP20718 246 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 CDK2P24941 298 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 SOX6P35712 828 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 RPS19P39019 145 aaKnown RBP9.96□□□□□ -0.82
SF3B3-208ENST00000567250 RORCP51449 518 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 DYNC1I2Q13409 638 aaKnown RBP9.96□□□□□ -0.82
SF3B3-208ENST00000567250 MIDNQ504T8 468 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 BRD3OSQ6XYD6 125 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 GAPTQ8N292 157 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 OR10R2Q8NGX6 335 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms