RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 LOC100506127A0A0U1RQW1 187 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 TMEM30CPA0ZSE6 113 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 MEX3AA1L020 520 aaKnown RBP17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 LDLRAD4O15165 306 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 CGB3P0DN86 165 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 CGB7P0DN87 165 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 ZNF497Q6ZNH5 498 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 SIGLECL1Q8N7X8 197 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 ZFAND2BQ8WV99 257 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 KCNK15Q9H427 330 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 SESN1Q9Y6P5 492 aa17.19■□□□□ 0.34
SHCBP1-205ENST00000566016 NOTOA8MTQ0 251 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 CHATP28329 748 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 SAA4P35542 130 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 CLDN12P56749 244 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 HES5Q5TA89 166 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 ZNF782Q6ZMW2 699 aaPredicted RBP17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 PDZD9Q8IXQ8 264 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 FAM89BQ8N5H3 189 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 OR13D1Q8NGV5 346 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 NEK7Q8TDX7 302 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 CENPOQ9BU64 300 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 LPAR5Q9H1C0 372 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 ING3Q9NXR8 418 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 KBTBD11-OT1A0A1B0GTJ5 212 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 SDC2P34741 201 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 GLP1RP43220 463 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 PRB3Q04118 309 aaPredicted RBP17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 DEFB112Q30KQ8 113 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 C2orf76Q3KRA6 126 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 OR52W1Q6IF63 320 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 OR11H6Q8NGC7 330 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 OR13A1Q8NGR1 328 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 OR13F1Q8NGS4 319 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 NEDD4LQ96PU5 975 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 MRPS26Q9BYN8 205 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 ZMAT3Q9HA38 289 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 LIN7BQ9HAP6 207 aa17.18■□□□□ 0.34
SHCBP1-205ENST00000566016 CLDN34H7C241 214 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 AIREO43918 545 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 VENTXO95231 258 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 FAM189A2Q15884 450 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 C17orf58Q2M2W7 97 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 PTX4Q96A99 478 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 NICN1Q9BSH3 213 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 TMEM133Q9H2Q1 129 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 ESM1Q9NQ30 184 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 ETAA1Q9NY74 926 aa17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 SOX21Q9Y651 276 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-205ENST00000566016 A0A0U1RQK1 487 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 TMEM272A0A1B0GTI8 110 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 ODF3BA8MYP8 253 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 IL1AP01583 271 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 MT-ND4P03905 459 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 FBP1P09467 338 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 RAB6AP20340 208 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 GZMHP20718 246 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 CDK2P24941 298 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 CD34P28906 385 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 ZNF626Q68DY1 528 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 BRICD5Q6PL45 260 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 LDLRAD3Q86YD5 345 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 PNKDQ8N490 385 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 CALYQ9NYX4 217 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 RAB22AQ9UL26 194 aa17.16■□□□□ 0.34
SHCBP1-205ENST00000566016 A0A087X0M5 115 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 A0A0A6YYD4 124 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 A0A1B0GX30 115 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 MEIOCA2RUB1 952 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 FOXI3A8MTJ6 420 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 NPIPB11E5RHQ5 1161 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 TMEM127O75204 238 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 MMP23AO75900 390 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 COX7A1P24310 79 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 SFXN4Q6P4A7 337 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 Q6YL49 198 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 ZDHHC22Q8N966 263 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 OR10A7Q8NGE5 316 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 RNF167Q9H6Y7 350 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 HSF4Q9ULV5 492 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 FAM96BQ9Y3D0 163 aa17.15■□□□□ 0.34
SHCBP1-205ENST00000566016 IGHV2-26A0A0B4J1V2 119 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 MDFIC2A0A1B0GVS7 189 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 DNAJC9-AS1A6NH13 148 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 BLVRBP30043 206 aaPredicted RBP17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 SCAND1P57086 179 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 NKAPLQ5M9Q1 402 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 PRAMEF5Q5TYX0 476 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 ZNF554Q86TJ5 538 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 TMEM86BQ8N661 226 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 OR56B1Q8NGI3 324 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 MRGPRDQ8TDS7 321 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 ZDHHC16Q969W1 377 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 KIRREL1Q96J84 757 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 FUNDC2Q9BWH2 189 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 CLEC7AQ9BXN2 247 aa17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 TBL2Q9Y4P3 447 aaKnown RBP17.14■□□□□ 0.33
SHCBP1-205ENST00000566016 TRIM77I1YAP6 450 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 ORC5O43913 435 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 BAMBIQ13145 260 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms