RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 C11orf44Q8N8P7 122 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 OR4D6Q8NGJ1 314 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 MUL1Q969V5 352 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 FOXRED1Q96CU9 486 aaPredicted RBP11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 COQ2Q96H96 371 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 CITED1Q99966 193 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 UQCC2Q9BRT2 126 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 METTL9Q9H1A3 318 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 UBE2J1Q9Y385 318 aaPredicted RBP11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 TET2Q6N021 2002 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 TRDV1A0A1B0GX56 115 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 ODAMA1E959 279 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 FAM90A8PA6NJQ4 464 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 RBP4P02753 201 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 SERPINA2P20848 420 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 GALP22466 123 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 PSMB9P28065 219 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 ERP29P30040 261 aaKnown RBP11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 GLP1RP43220 463 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 LTC4SQ16873 150 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 SYT6Q5T7P8 510 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 CHST4Q8NCG5 386 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 OR11H6Q8NGC7 330 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 PIFOQ8TCI5 191 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 MALSU1Q96EH3 234 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 S100A13Q99584 98 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 GAL3ST2Q9H3Q3 398 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 PCDHB16Q9NRJ7 776 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 ZNF581Q9P0T4 197 aa11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 MRPS28Q9Y2Q9 187 aaKnown RBP11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 PRKDCP78527 4128 aaKnown RBP11.01□□□□□ -0.65
VPS9D1-204ENST00000565023 MEIKINA0A087WXM9 373 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 M0QZ24 198 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 F2RL2O00254 374 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 TIMM23O14925 209 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 IGHV3-7P01780 117 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 CSTBP04080 98 aaKnown RBP11□□□□□ -0.65
VPS9D1-204ENST00000565023 NFYBP25208 207 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 GPR176Q14439 515 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 RBM39Q14498 530 aaKnown RBP11□□□□□ -0.65
VPS9D1-204ENST00000565023 HABP2Q14520 560 aaPredicted RBP11□□□□□ -0.65
VPS9D1-204ENST00000565023 SLC22A6Q4U2R8 563 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
VPS9D1-204ENST00000565023 C1orf100Q5SVJ3 147 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 GLT8D1Q68CQ7 371 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 AWAT2Q6E213 333 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 GLIPR1L1Q6UWM5 242 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 ABHD12Q8N2K0 398 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 OSR2Q8N2R0 312 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 TSPAN14Q8NG11 270 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 MRPS24Q96EL2 167 aaKnown RBP11□□□□□ -0.65
VPS9D1-204ENST00000565023 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 IFT22Q9H7X7 185 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 RAB18Q9NP72 206 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 GHRLQ9UBU3 117 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 KIF25Q9UIL4 384 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 TCF19Q9Y242 345 aa11□□□□□ -0.65
VPS9D1-204ENST00000565023 TRRAPQ9Y4A5 3859 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 A0A087WXM4 84 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 TRAV39A0A0B4J263 110 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 TRAV24A0A0B4J272 114 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 A0A1W2PP11 408 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 TRIM64CA6NLI5 447 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 TOR1AO14656 332 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 SLC22A1O15245 554 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 CSN2P05814 226 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 VSIG10L2P0DP72 767 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 GTF2F2P13984 249 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 CD24P25063 80 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 HTR1DP28221 377 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 RBM11P57052 281 aaKnown RBP10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 NEDD8Q15843 81 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 AANATQ16613 207 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 CCBE1Q6UXH8 406 aaPredicted RBP10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 OR13A1Q8NGR1 328 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 OR2T6Q8NHC8 308 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 PLPPR1Q8TBJ4 325 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 GFI1Q99684 422 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 ZNF286AQ9HBT8 521 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 TAS2R3Q9NYW6 316 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 ST3GAL6Q9Y274 331 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
VPS9D1-204ENST00000565023 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 TRAV1-2A0A0B4J238 106 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 OR7C1O76099 320 aaPredicted RBP10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 TSPAN15O95858 294 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 UBBP0CG47 229 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 C17orf58Q2M2W7 97 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 UTF1Q5T230 341 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 ATAD3CQ5T2N8 411 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 OR52W1Q6IF63 320 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 HEPN1Q6WQI6 88 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 LINC00596Q86U02 117 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 OR4P4Q8NGL7 312 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms