RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PAX5Q02548 391 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
RAB40C-208ENST00000564703 UNC119Q13432 240 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 ZNF782Q6ZMW2 699 aaPredicted RBP13.08□□□□□ -0.32
RAB40C-208ENST00000564703 USP43Q70EL4 1123 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 BCL6BQ8N143 479 aaPredicted RBP13.08□□□□□ -0.32
RAB40C-208ENST00000564703 OR56B1Q8NGI3 324 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 PLPPR1Q8TBJ4 325 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 TNFRSF14Q92956 283 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 FUNDC2Q9BWH2 189 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 RNF167Q9H6Y7 350 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 RCC2Q9P258 522 aaKnown RBP13.08□□□□□ -0.32
RAB40C-208ENST00000564703 DAPK2Q9UIK4 370 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 TRAPPC2LQ9UL33 140 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 KBTBD11-OT1A0A1B0GTJ5 212 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 NPFFO15130 113 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 PAHP00439 452 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 MT-ND4P03905 459 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 SMIM18P0DKX4 95 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 SLC2A2P11168 524 aaPredicted RBP13.07□□□□□ -0.32
RAB40C-208ENST00000564703 COX7A1P24310 79 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 CDK2P24941 298 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 CFPP27918 469 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 DLX1P56177 255 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 KLRD1Q13241 179 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 DYNC1I2Q13409 638 aaKnown RBP13.07□□□□□ -0.32
RAB40C-208ENST00000564703 HEPN1Q6WQI6 88 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 GPR141Q7Z602 305 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 CROCCP3Q8IVE0 287 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 PNKDQ8N490 385 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 OR13F1Q8NGS4 319 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 CCDC107Q8WV48 283 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 NICN1Q9BSH3 213 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 RAB9BQ9NP90 201 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 SESN1Q9Y6P5 492 aa13.07□□□□□ -0.32
RAB40C-208ENST00000564703 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 MEIOCA2RUB1 952 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 CLPXO76031 633 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 CLEC2LP0C7M8 214 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 RAB6AP20340 208 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 VEGFCP49767 419 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 MIDNQ504T8 468 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 IDNKQ5T6J7 187 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 SIGIRRQ6IA17 410 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 SFXN4Q6P4A7 337 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 ZNF497Q6ZNH5 498 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 Q6ZTK2 550 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 TCF23Q7RTU1 214 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 FAM89BQ8N5H3 189 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 SIGLECL1Q8N7X8 197 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 OR13A1Q8NGR1 328 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 PTX4Q96A99 478 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 FAAP24Q9BTP7 215 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 KCNIP1Q9NZI2 227 aa13.06□□□□□ -0.32
RAB40C-208ENST00000564703 SOCS1O15524 211 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 TMEM127O75204 238 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 NFYBP25208 207 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 CHATP28329 748 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 PRRX1P54821 245 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 BAMBIQ13145 260 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 DEFB112Q30KQ8 113 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 C6orf183Q5T699 404 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 TRAT1Q6PIZ9 186 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 C6orf201Q7Z4U5 140 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 NR2C2APQ86WQ0 139 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 OR4K15Q8NH41 348 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 RFESDQ8TAC1 157 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 PHF21AQ96BD5 680 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 ATG5Q9H1Y0 275 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
RAB40C-208ENST00000564703 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
RAB40C-208ENST00000564703 A0A0B4J203 849 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 TRAV39A0A0B4J263 110 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 TRIM77I1YAP6 450 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 TOR1AO14656 332 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 LDLRAD4O15165 306 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 SPINT2O43291 252 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 ORC5O43913 435 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 IL1AP01583 271 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 ARG1P05089 322 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 TFAP2AP05549 437 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 FBP1P09467 338 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 CGB3P0DN86 165 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 CGB7P0DN87 165 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 OMGP23515 440 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 SAA4P35542 130 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 HILS1P60008 231 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
RAB40C-208ENST00000564703 PRAMEF5Q5TYX0 476 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 GPR107Q5VW38 600 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 RTN4RL2Q86UN3 420 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 ABHD12Q8N2K0 398 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 OR10A7Q8NGE5 316 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms