RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SFXN2Q96NB2 322 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF385AQ96PM9 386 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 DERL3Q96Q80 235 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TSPAN32Q96QS1 320 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR8B4Q96RC9 309 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SDHCQ99643 169 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 UQCC2Q9BRT2 126 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MARVELD1Q9BSK0 173 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MRPL13Q9BYD1 178 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR2B2Q9GZK3 357 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 RAB1BQ9H0U4 201 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 CSTL1Q9H114 145 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MIXL1Q9H2W2 232 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 DPAGT1Q9H3H5 408 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 C1orf198Q9H425 327 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 RNF121Q9H920 327 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ELOVL3Q9HB03 270 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PLEKHA1Q9HB21 404 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 B3GAT2Q9NPZ5 323 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PAQR5Q9NXK6 330 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 PTTG3PQ9NZH4 202 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MED11Q9P086 117 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 GHRLQ9UBU3 117 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OPN4Q9UHM6 478 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF107Q9UII5 783 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF221Q9UK13 617 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 HHLA2Q9UM44 414 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ING4Q9UNL4 249 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR2W1Q9Y3N9 320 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 NUBP2Q9Y5Y2 271 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 R4GMQ9 66 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TET2Q6N021 2002 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 MUC4Q99102 2169 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 HEATR5BQ9P2D3 2071 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TRBV5-5A0A0J9YX44 114 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 A0A1B0GVI7 797 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TMEM269A0A1B0GVZ9 245 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 A0A1W2PR80 420 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 FAM172BPA6NC97 362 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 DHRS7CA6NNS2 312 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 B4DXG7 233 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 FAM90A26D6RGX4 464 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ZNF587BE7ETH6 402 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 C11orf98E9PRG8 122 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 INMT-MINDY4F8WBC2 141 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 H0YL77 283 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 J3QLI3 93 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 J3QR06 171 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PLA2G10O15496 165 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 XRCC3O43542 346 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 SELENOFO60613 162 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 RBBP9O75884 186 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 LYZL6O75951 148 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 KRT33AO76009 404 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 RPP14O95059 124 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 AKR7A3O95154 331 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 NDUFA7O95182 113 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 H2BFMP0C1H6 154 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 UBBP0CG47 229 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR8G3PP0DMU2 310 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 CD37P11049 281 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PSKH1P11801 424 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 IL11P20809 199 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 COL8A2P25067 703 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 HSD11B1P28845 292 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ERP29P30040 261 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 SRD5A2P31213 254 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 RCVRNP35243 200 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 GPR6P46095 362 aaPredicted RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 IDH3GP51553 393 aaPredicted RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 HCCSP53701 268 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PCBD1P61457 104 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 LMO4P61968 165 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 GRB2P62993 217 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 H3F3AP84243 136 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 UBE2V1Q13404 147 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 GUSBP1Q15486 140 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 RAB11BQ15907 218 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 BCL2A1Q16548 175 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 HIST3H3Q16695 136 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 MS4A18Q3C1V0 323 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 NSUN5P1Q3KNT7 163 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TMEM176BQ3YBM2 270 aaPredicted RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 ZFP69Q49AA0 526 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ELFN2Q5R3F8 820 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TMEM69Q5SWH9 247 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 BCL2L15Q5TBC7 163 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR5M10Q6IEU7 315 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 SPSB3Q6PJ21 355 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 UNQ6126/PRO20091Q6UXV3 157 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PGAP1Q75T13 922 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 KRT74Q7RTS7 529 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 DPPA2Q7Z7J5 298 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 CATSPERDQ86XM0 798 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ELMOD2Q8IZ81 293 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TCTE3Q8IZS6 198 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 C1orf87Q8N0U7 546 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 GABRG1Q8N1C3 465 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 Q8NFD4 153 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms