RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 RAB2AP61019 212 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 DEFA6Q01524 100 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 BIKQ13323 160 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF235Q14590 738 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 KRTAP25-1Q3LHN0 102 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 PYDC2Q56P42 97 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 TMEM215Q68D42 235 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 WDR59Q6PJI9 974 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 TCF23Q7RTU1 214 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 NT5DC3Q86UY8 548 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 ATP6V1C2Q8NEY4 427 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 OR8A1Q8NGG7 326 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 RORBQ92753 470 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 YIPF5Q969M3 257 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 OR51E2Q9H255 320 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 CHMP4BQ9H444 224 aaKnown RBP1.58□□□□□ -2.16
SCFD1-213ENST00000554776 DUSP21Q9H596 190 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 RHOFQ9HBH0 211 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 ASF1BQ9NVP2 202 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 TRAPPC1Q9Y5R8 145 aa1.58□□□□□ -2.16
SCFD1-213ENST00000554776 DNMT1P26358 1616 aaKnown RBP1.58□□□□□ -2.16
SCFD1-213ENST00000554776 ATRNO75882 1429 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 SSH2Q76I76 1423 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 ADGRL1O94910 1474 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 ARGFXA6NJG6 315 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 LEUTXA8MZ59 168 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 C4orf51C9J302 202 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 H3BMM0 161 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 C15orf65H3BRN8 121 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 AQP9O43315 295 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 TCF21O43680 179 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 RAB36O95755 333 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 CTLA4P16410 223 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 CRABP2P29373 138 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 GRPRP30550 384 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 ACTR1BP42025 376 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 SULT1A2P50226 295 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 MP68P56378 58 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 SKP1P63208 163 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF141Q15928 474 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 IGFBP7Q16270 282 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 TMEM249Q2WGJ8 235 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 LGALSLQ3ZCW2 172 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-213ENST00000554776 RBM48Q5RL73 367 aaKnown RBP1.57□□□□□ -2.16
SCFD1-213ENST00000554776 BLIDQ8IZY5 108 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 SLC25A45Q8N413 288 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 OR11G2Q8NGC1 345 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 OR11L1Q8NGX0 322 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 ZNRF2Q8NHG8 242 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 DYNC2LI1Q8TCX1 351 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 UBE2WQ96B02 151 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 IGF2BP2-AS1Q96M15 143 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 TRNT1Q96Q11 434 aaKnown RBP1.57□□□□□ -2.16
SCFD1-213ENST00000554776 PRSS27Q9BQR3 290 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 EBPLQ9BY08 206 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 METTL8Q9H825 291 aaKnown RBP1.57□□□□□ -2.16
SCFD1-213ENST00000554776 DMAC2Q9NW81 257 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF391Q9UJN7 358 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 U3KQK5 164 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 TMEM94Q12767 1356 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 KIAA0232Q92628 1395 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 RAB3GAP2Q9H2M9 1393 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 PRR14LQ5THK1 2151 aa1.57□□□□□ -2.16
SCFD1-213ENST00000554776 IGKV2-24A0A0C4DH68 120 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 GOLGA6L4A6NEF3 574 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 OR5H14A6NHG9 310 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 C9J4A7 227 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 POP7O75817 140 aaKnown RBP1.56□□□□□ -2.16
SCFD1-213ENST00000554776 ATP6V1G2O95670 118 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 AKR1C4P17516 323 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 ATF1P18846 271 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 PVALBP20472 110 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-213ENST00000554776 ELK4P28324 431 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 ADORA1P30542 326 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 RCVRNP35243 200 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 HSPA13P48723 471 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 FOXA1P55317 472 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 UBE2G2P60604 165 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 CASP8Q14790 479 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 BCL2A1Q16548 175 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 SPIN3Q5JUX0 258 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 FAM162BQ5T6X4 162 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 HES3Q5TGS1 186 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 PDPK2PQ6A1A2 396 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 SSX7Q7RTT5 188 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 COMTD1Q86VU5 262 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 CALHM3Q86XJ0 350 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 MUC15Q8N387 334 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 EIF4E3Q8N5X7 224 aaKnown RBP1.56□□□□□ -2.16
SCFD1-213ENST00000554776 OR7G1Q8NGA0 311 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 MUC7Q8TAX7 377 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 CLDN23Q96B33 292 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 LRRC45Q96CN5 670 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 OR2D2Q9H210 308 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 KCNIP2Q9NS61 270 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 C1orf109Q9NX04 203 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 EURLQ9NYK6 297 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 TAS2R1Q9NYW7 299 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 OR5V1Q9UGF6 321 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 NAGKQ9UJ70 344 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms