RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 DGCR6LQ9BY27 220 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 R4GMQ9 66 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 MEIKINA0A087WXM9 373 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 H3BN98 237 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 ARPC1BO15143 372 aaKnown RBP10.53□□□□□ -0.72
PRPF39-204ENST00000553605 RGS11O94810 467 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 MRPL3P09001 348 aaKnown RBP10.53□□□□□ -0.72
PRPF39-204ENST00000553605 CCL1P22362 96 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 PSME3P61289 254 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 Q6P435 159 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 HACD2Q6Y1H2 254 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 YIPF7Q8N8F6 280 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 MINDY2Q8NBR6 621 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 CHST4Q8NCG5 386 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 BBS1Q8NFJ9 593 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 OR10A7Q8NGE5 316 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 RTN4IP1Q8WWV3 396 aaPredicted RBP10.53□□□□□ -0.72
PRPF39-204ENST00000553605 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 THAP7Q9BT49 309 aaPredicted RBP10.53□□□□□ -0.72
PRPF39-204ENST00000553605 CHST5Q9GZS9 411 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 FAM53CQ9NYF3 392 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 KIF25Q9UIL4 384 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 SNX5Q9Y5X3 404 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 TMEM14AQ9Y6G1 99 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 ABCA13Q86UQ4 5058 aa10.53□□□□□ -0.72
PRPF39-204ENST00000553605 SHISA3A0PJX4 238 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 DEGS1O15121 323 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 SLC2A5P22732 501 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 MTCP1P56278 107 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 MICAQ29983 383 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 ODF4Q2M2E3 257 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 CEMP1Q6PRD7 247 aaPredicted RBP10.52□□□□□ -0.73
PRPF39-204ENST00000553605 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 DNAAF1Q8NEP3 725 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 OR51T1Q8NGJ9 327 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 CASTOR1Q8WTX7 329 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 ATP6V1G3Q96LB4 118 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 MBOAT4Q96T53 435 aa10.52□□□□□ -0.73
PRPF39-204ENST00000553605 MAGEB4O15481 346 aaPredicted RBP10.51□□□□□ -0.73
PRPF39-204ENST00000553605 SYT7O43581 403 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 CNIH1O95406 144 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 IGHV3-11P01762 117 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 MED14OSP0DP75 135 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 ACTR3P61158 418 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 RAB40BQ12829 278 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 PDZK1IP1Q13113 114 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 APOFQ13790 326 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 MRGPRDQ8TDS7 321 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 NIPSNAP1Q9BPW8 284 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 NCOR1P1Q9H4R4 102 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 PLEKHA3Q9HB20 300 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 SLC25A19Q9HC21 320 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 SPAG4Q9NPE6 437 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 MAGEL2Q9UJ55 1249 aa10.51□□□□□ -0.73
PRPF39-204ENST00000553605 IGHV7-81A0A0B4J1V7 117 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 IGKV1-12A0A0C4DH73 117 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 A0A1W2PN81 502 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 HSPB6O14558 160 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 SOX15O60248 233 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 IGKV1D-12P01611 117 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 SSTR5P35346 364 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 CHRNA7P36544 502 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 GINS1Q14691 196 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 MMDQ15546 238 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 ZNF322Q6U7Q0 402 aaPredicted RBP10.5□□□□□ -0.73
PRPF39-204ENST00000553605 CD300LDQ6UXZ3 194 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 LINC00311Q8N616 119 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 TMEM106AQ96A25 262 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 BARHL1Q9BZE3 327 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 ERGIC3Q9Y282 383 aa10.5□□□□□ -0.73
PRPF39-204ENST00000553605 KLK5Q9Y337 293 aaPredicted RBP10.5□□□□□ -0.73
PRPF39-204ENST00000553605 IGKV1-9A0A0C4DH69 117 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 KDM4BO94953 1096 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 HLA-DRB1P01911 266 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 HMGN1P05114 100 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 IL3RAP26951 378 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 BLVRBP30043 206 aaPredicted RBP10.49□□□□□ -0.73
PRPF39-204ENST00000553605 CXCR4P61073 352 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 LCN12Q6JVE5 192 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 RDH10Q8IZV5 341 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 PP6455Q8WZ26 134 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 RGP1Q92546 391 aaPredicted RBP10.49□□□□□ -0.73
PRPF39-204ENST00000553605 RFT1Q96AA3 541 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 ADI1Q9BV57 179 aa10.49□□□□□ -0.73
PRPF39-204ENST00000553605 TXNL1O43396 289 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 PRKACBP22694 351 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 VHLP40337 213 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 MAGEA2P43356 314 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 CDK5R1Q15078 307 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 ECSCRQ19T08 205 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 C19orf54Q5BKX5 351 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 IL34Q6ZMJ4 242 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 Q8N402 240 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 CCDC54Q8NEL0 328 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 C10orf35Q96D05 121 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms