RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 IGSF11Q5DX21 431 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 MOB1BQ7L9L4 216 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 NUFIP2Q7Z417 695 aaKnown RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF695Q8IW36 515 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 ARL6IP6Q8N6S5 226 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 BOLLQ8N9W6 283 aaKnown RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 KDF1Q8NAX2 398 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 TP53RKQ96S44 253 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 UBE2J1Q9Y385 318 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 FREM2Q5SZK8 3169 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 FRYQ5TBA9 3013 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 NPIPB11E5RHQ5 1161 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 RNASEK-C17orf49H0YIS7 233 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 RCC1P18754 421 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-205ENST00000553474 VDAC1P21796 283 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 UCP1P25874 307 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 FLI1Q01543 452 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-205ENST00000553474 SRSF6Q13247 344 aaKnown RBP11.04□□□□□ -0.64
SHMT2-205ENST00000553474 C9orf135Q5VTT2 229 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF880Q6PDB4 577 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 Q6ZRG5 221 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 TBC1D26Q86UD7 250 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 OR11L1Q8NGX0 322 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 BCL2L2Q92843 193 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-205ENST00000553474 FGF23Q9GZV9 251 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-205ENST00000553474 SLC25A31Q9H0C2 315 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 SMDT1Q9H4I9 107 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF552Q9H707 407 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-205ENST00000553474 PLA2G3Q9NZ20 509 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 IL17BQ9UHF5 180 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 MED13Q9UHV7 2174 aa11.04□□□□□ -0.64
SHMT2-205ENST00000553474 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 SLC22A20A6NK97 555 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 FAM74A7A6NL05 159 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 H0Y980 276 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 H7C2Y5 167 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 J3QT63 122 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 IL18BPO95998 194 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 NGFP01138 241 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 SLC25A6P12236 298 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 AKR1C2P52895 323 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 TGFBR3Q03167 851 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 AKR1C1Q04828 323 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 GUCA2BQ16661 112 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 FAM76BQ5HYJ3 339 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 HAGHLQ6PII5 290 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 FAM219AQ8IW50 185 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 FAM58AQ8N1B3 248 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 LFNGQ8NES3 379 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 DMBX1Q8NFW5 382 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 OR52M1Q8NGK5 317 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 NEK7Q8TDX7 302 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 GMPPAQ96IJ6 420 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 BOD1Q96IK1 185 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 CABLES2Q9BTV7 478 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 ZDHHC11Q9H8X9 412 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 KPTNQ9Y664 436 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 ARID1AO14497 2285 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 DEGS1O15121 323 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 TSPAN15O95858 294 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 CCL2P13500 99 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 MUC1P15941 1255 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 PRKACAP17612 351 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 FOXG1P55316 489 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 BAXQ07812 192 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 PDCD1Q15116 288 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 OR8G1Q15617 311 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 TBC1D28Q2M2D7 210 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 SPIN3Q5JUX0 258 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 SHEQ5VZ18 495 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 OR2C3Q8N628 320 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 SUMF2Q8NBJ7 301 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 KIRREL1Q96J84 757 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 RTL8AQ9BWD3 113 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 C11orf1Q9H5F2 150 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 RCL1Q9Y2P8 373 aaKnown RBP11.03□□□□□ -0.64
SHMT2-205ENST00000553474 POLDIP2Q9Y2S7 368 aa11.03□□□□□ -0.64
SHMT2-205ENST00000553474 C1QTNF9BB2RNN3 333 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 UMAD1C9J7I0 102 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 KLK10O43240 276 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF205O95201 554 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 CNOT4O95628 575 aaKnown RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 C1QTNF9P0C862 333 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 PAX6P26367 422 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 WNT5AP41221 380 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 SRSF3P84103 164 aaKnown RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 HERPUD1Q15011 391 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms