RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CD47Q08722 323 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 TCP10Q12799 353 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 KIAA0087Q14695 138 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 HERPUD1Q15011 391 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 AKR1C8PQ5T2L2 129 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 ATAD3CQ5T2N8 411 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 C3orf62Q6ZUJ4 267 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 C4orf32Q8N8J7 132 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 TMEM159Q96B96 161 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 ZNF689Q96CS4 500 aaPredicted RBP4.82□□□□□ -1.64
VPS29-210ENST00000552130 SMIM8Q96KF7 97 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 FCRL1Q96LA6 429 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 OR4K3Q96R72 315 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 EBF4Q9BQW3 602 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 EFCAB11Q9BUY7 163 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 RNASE7Q9H1E1 156 aaKnown RBP4.82□□□□□ -1.64
VPS29-210ENST00000552130 HES4Q9HCC6 221 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 UBQLN4Q9NRR5 601 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 ZNF580Q9UK33 172 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 PRNDQ9UKY0 176 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 PSG8Q9UQ74 426 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 HDGFL3Q9Y3E1 203 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 HES2Q9Y543 173 aa4.82□□□□□ -1.64
VPS29-210ENST00000552130 WRNQ14191 1432 aaPredicted RBP eCLIP4.81□□□□□ -1.64
VPS29-210ENST00000552130 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 IGHV7-81A0A0B4J1V7 117 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 FAM236DA0A1B0GTK5 79 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 A0A1B0GV50 99 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 FAM172BPA6NC97 362 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 M0QYV0 167 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 SNAP91O60641 907 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 MMP23AO75900 390 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 ZFAND5O76080 213 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 CA2P00918 260 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 TRBV12-3P01733 135 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 HBZP02008 142 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 FAM236CP0DP71 79 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 KLK2P20151 261 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 PHBP35232 272 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 GLRXP35754 106 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 MAP2K4P45985 399 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 NCBP2P52298 156 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS29-210ENST00000552130 EBPQ15125 230 aaKnown RBP4.81□□□□□ -1.64
VPS29-210ENST00000552130 RGNQ15493 299 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 Q499Y3 187 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 ZNF506Q5JVG8 444 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 SLC25A30Q5SVS4 291 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 FBXW9Q5XUX1 488 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 AWAT2Q6E213 333 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 GOLT1AQ6ZVE7 132 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 OSR2Q8N2R0 312 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 OR9Q1Q8NGQ5 310 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 SLC35G5Q96KT7 338 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 RNF157Q96PX1 679 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 PRSS27Q9BQR3 290 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 C1orf50Q9BV19 199 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 UQCC1Q9NVA1 299 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 DPM3Q9P2X0 92 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 RSL24D1Q9UHA3 163 aaKnown RBP4.81□□□□□ -1.64
VPS29-210ENST00000552130 BTRCQ9Y297 605 aa4.81□□□□□ -1.64
VPS29-210ENST00000552130 PTPRKQ15262 1439 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 IGHV1-69DA0A0B4J2H0 117 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 hADV38S2A0JD32 116 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 MYBPHLA2RUH7 354 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 PGPA6NDG6 321 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 ARL5CA6NH57 179 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 E7EQ34 232 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 G3V2T6 193 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 PSPHP1O15172 72 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 DLEU1O43261 78 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 KCNK2O95069 426 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 C1QBP02746 253 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 CD48P09326 243 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 RAB3AP20336 220 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 ZBTB25P24278 435 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 ZNF138P52744 262 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 TBPL1P62380 186 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 GNG5P63218 68 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 CDK5Q00535 292 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 NSDHLQ15738 373 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 MESTQ5EB52 335 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 SLC35E4Q6ICL7 350 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 TMEM179BQ7Z7N9 219 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 C20orf196Q8IYI0 205 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 OR2G3Q8NGZ4 309 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 OR2T4Q8NH00 348 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 SH3BGRL3Q9H299 93 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 LYRM2Q9NU23 88 aaPredicted RBP4.8□□□□□ -1.64
VPS29-210ENST00000552130 CNTLNQ9NXG0 1405 aa4.8□□□□□ -1.64
VPS29-210ENST00000552130 RTL9Q8NET4 1388 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 MYO15BQ96JP2 1530 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 PLAC8L1A1L4L8 177 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 C5orf49A4QMS7 147 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 OR5H1A6NKK0 313 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 C5orf58C9J3I9 102 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms