RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 AP4S1Q9Y587 144 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 KMT2AQ03164 3969 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 GNGT2O14610 69 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 CYB5AP00167 134 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 CST1P01037 141 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 CALCBP10092 127 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 FCGR1AP12314 374 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 CD1BP29016 333 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 SNU13P55769 128 aaKnown RBP9.15□□□□□ -0.94
PTCH1-222ENST00000551425 GK3PQ14409 553 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 KIAA2026Q5HYC2 2103 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 OR2T5Q6IEZ7 315 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 CD300LDQ6UXZ3 194 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 HAPLN4Q86UW8 402 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
PTCH1-222ENST00000551425 TMEM104Q8NE00 496 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 OR2T29Q8NH02 315 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 TEX47Q8TBZ9 253 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 BORCS8Q96FH0 119 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 FAM110AQ9BQ89 295 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 OSBPL10Q9BXB5 764 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 COMMD4Q9H0A8 199 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 TUBA4BQ9H853 241 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 IDI2-AS1Q9NZ38 188 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 OR52A1Q9UKL2 312 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 GTF2A1LQ9UNN4 478 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
PTCH1-222ENST00000551425 IGHV4OR15-8A0A075B7B6 117 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 A0A087WW49 117 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 NPIPB11E5RHQ5 1161 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 GATBO75879 557 aaKnown RBP9.14□□□□□ -0.95
PTCH1-222ENST00000551425 IL1AP01583 271 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 SLC2A5P22732 501 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 FASP25445 335 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 REG1BP48304 166 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 GNG10P50151 68 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-222ENST00000551425 CPOQ8IVL8 374 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 ZNF565Q8N9K5 539 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 CHST4Q8NCG5 386 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 OR10A7Q8NGE5 316 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 PYDC1Q8WXC3 89 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 ELOVL1Q9BW60 279 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 CHST5Q9GZS9 411 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 PPIL3Q9H2H8 161 aaKnown RBP9.14□□□□□ -0.95
PTCH1-222ENST00000551425 NCOR1P1Q9H4R4 102 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 REEP1Q9H902 201 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 PLEKHA1Q9HB21 404 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 ING3Q9NXR8 418 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 ZNF107Q9UII5 783 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-222ENST00000551425 COPS3Q9UNS2 423 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 TMEM14AQ9Y6G1 99 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 WSB1Q9Y6I7 421 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 R4GMQ9 66 aa9.14□□□□□ -0.95
PTCH1-222ENST00000551425 G3V318 75 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 SLC33A1O00400 549 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 LGALS1P09382 135 aaKnown RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 GLP1RP43220 463 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 RBP2P50120 134 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 ATP1B3P54709 279 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 F2RL1P55085 397 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 RPS7P62081 194 aaKnown RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 ATXN7L3Q14CW9 347 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 MICAQ29983 383 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 Q6P435 159 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 ANKRD13BQ86YJ7 626 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 MINDY2Q8NBR6 621 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 BBS1Q8NFJ9 593 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 OR13A1Q8NGR1 328 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 THAP7Q9BT49 309 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 ST6GALNAC5Q9BVH7 336 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 TMED9Q9BVK6 235 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 S100A14Q9HCY8 104 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 MRM2Q9UI43 246 aaKnown RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 IKZF2Q9UKS7 526 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 SAMHD1Q9Y3Z3 626 aaKnown RBP9.13□□□□□ -0.95
PTCH1-222ENST00000551425 SNX5Q9Y5X3 404 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 DNAH10Q8IVF4 4471 aa9.13□□□□□ -0.95
PTCH1-222ENST00000551425 H3BN98 237 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 ARPC1BO15143 372 aaKnown RBP9.12□□□□□ -0.95
PTCH1-222ENST00000551425 SERPINA3P01011 423 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 ZNF44P15621 663 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 C21orf33P30042 268 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-222ENST00000551425 HTR1FP30939 366 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 SCN1BQ07699 218 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 PPP1R8Q12972 351 aaKnown RBP9.12□□□□□ -0.95
PTCH1-222ENST00000551425 ATP6AP1Q15904 470 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 OR51T1Q8NGJ9 327 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 RTN4IP1Q8WWV3 396 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-222ENST00000551425 FLYWCH2Q96CP2 140 aaKnown RBP9.12□□□□□ -0.95
PTCH1-222ENST00000551425 NIPSNAP1Q9BPW8 284 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 TTTY10Q9BZA0 68 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 CEPT1Q9Y6K0 416 aa9.12□□□□□ -0.95
PTCH1-222ENST00000551425 TNCP24821 2201 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 TRAV41A0A0B4J266 112 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 IGKV1-12A0A0C4DH73 117 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms