RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283		Q96M66	194 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	DMRTB1	Q96MA1	342 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	NICN1	Q9BSH3	213 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	CHIA	Q9BZP6	476 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	WDR12	Q9GZL7	423 aa	Known RBP	9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	RHOF	Q9HBH0	211 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	TCF7L1	Q9HCS4	588 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	CCDC59	Q9P031	241 aa	Known RBP	9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283	LINC00312	Q9Y6C7	94 aa		9.11	□□□□□ -0.95
RAB5B-208	ENST00000550283		A0A0A6YYJ9	748 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	MEIOC	A2RUB1	952 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	ODF3B	A8MYP8	253 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	OR7C1	O76099	320 aa	Predicted RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	IGHV3-7	P01780	117 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	CSN2	P05814	226 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	MGMT	P16455	207 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	MAPK3	P27361	379 aa	Predicted RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	CALR	P27797	417 aa	Known RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	ERP29	P30040	261 aa	Known RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	TGFBR1	P36897	503 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	RELB	Q01201	579 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	MEF2C	Q06413	473 aa	Predicted RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	KRBOX4	Q5JUW0	171 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	C16orf87	Q6PH81	154 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	FIP1L1	Q6UN15	594 aa	Known RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	OR5D13	Q8NGL4	314 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	MCFD2	Q8NI22	146 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	CORO2A	Q92828	525 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	LEAP2	Q969E1	77 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	FOXRED1	Q96CU9	486 aa	Predicted RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	RBMXL1	Q96E39	390 aa	Known RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	ZNF714	Q96N38	554 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	DPCD	Q9BVM2	203 aa	Predicted RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	SELENOI	Q9C0D9	397 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	IFT22	Q9H7X7	185 aa		9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	RCC2	Q9P258	522 aa	Known RBP	9.1	□□□□□ -0.95
RAB5B-208	ENST00000550283	hADV38S2	A0JD32	116 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	CRTAP	O75718	401 aa	Predicted RBP	9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	MPIG6B	O95866	241 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	GTF2F2	P13984	249 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	CDK2	P24941	298 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	PSMA1	P25786	263 aa	Known RBP	9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	HTR2C	P28335	458 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	SSTR5	P35346	364 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	IER3	P46695	156 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	PLA1A	Q53H76	456 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	C22orf42	Q6IC83	251 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	CDH26	Q8IXH8	852 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	NKAIN3	Q8N8D7	197 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	CHST4	Q8NCG5	386 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	OR6Q1	Q8NGQ2	317 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	RFESD	Q8TAC1	157 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	PIFO	Q8TCI5	191 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	MRGPRD	Q8TDS7	321 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	FAM216A	Q8WUB2	273 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	CPNE2	Q96FN4	548 aa	Predicted RBP	9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	UQCC2	Q9BRT2	126 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	CENPO	Q9BU64	300 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	ZNF286A	Q9HBT8	521 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	PALMD	Q9NP74	551 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	GLS2	Q9UI32	602 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	STUB1	Q9UNE7	303 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	SSR3	Q9UNL2	185 aa		9.09	□□□□□ -0.95
RAB5B-208	ENST00000550283	KIAA2026	Q5HYC2	2103 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	MEIKIN	A0A087WXM9	373 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	TRDV1	A0A1B0GX56	115 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	FAM90A8P	A6NJQ4	464 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	TMEM14DP	A8MWL7	114 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283		J3QRK9	145 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	CSTB	P04080	98 aa	Known RBP	9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	RNASE1	P07998	156 aa	Known RBP	9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	CLEC2L	P0C7M8	214 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	SLC2A2	P11168	524 aa	Predicted RBP	9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	SOX6	P35712	828 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	GLP1R	P43220	463 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	RAB13	P51153	203 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	EFNB2	P52799	333 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	ATAD3C	Q5T2N8	411 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	HES5	Q5TA89	166 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	NCR3LG1	Q68D85	454 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	ZNF626	Q68DY1	528 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	GDPGP1	Q6ZNW5	385 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	TRAPPC6B	Q86SZ2	158 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	LDLRAD3	Q86YD5	345 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	OR51D1	Q8NGF3	324 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	CCDC107	Q8WV48	283 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	SULT4A1	Q9BR01	284 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	SLIRP	Q9GZT3	109 aa	Known RBP	9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	LPAR5	Q9H1C0	372 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	MMP27	Q9H306	513 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	AKIP1	Q9NQ31	210 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	TXNL4B	Q9NX01	149 aa	Known RBP	9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	FBLN5	Q9UBX5	448 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	UBE2J1	Q9Y385	318 aa	Predicted RBP	9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	SESN1	Q9Y6P5	492 aa		9.08	□□□□□ -0.96
RAB5B-208	ENST00000550283	IGHV2-26	A0A0B4J1V2	119 aa		9.07	□□□□□ -0.96
RAB5B-208	ENST00000550283		A0A1B0GVG6	124 aa		9.07	□□□□□ -0.96
RAB5B-208	ENST00000550283	UBE2QL1	A1L167	161 aa		9.07	□□□□□ -0.96
RAB5B-208	ENST00000550283	FAM181B	A6NEQ2	426 aa		9.07	□□□□□ -0.96
RAB5B-208	ENST00000550283	FOXI3	A8MTJ6	420 aa	Predicted RBP	9.07	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 69 ms