RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 HEPN1Q6WQI6 88 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 ZNF497Q6ZNH5 498 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 PDZD9Q8IXQ8 264 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 OR13D1Q8NGV5 346 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 LIN7BQ9HAP6 207 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 ETAA1Q9NY74 926 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 NAV3Q8IVL0 2385 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 DOCK11Q5JSL3 2073 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 TMEM272A0A1B0GTI8 110 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 KBTBD11-OT1A0A1B0GTJ5 212 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 TMEM127O75204 238 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 MT-ND4P03905 459 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 CGB3P0DN86 165 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 CGB7P0DN87 165 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 RAB6AP20340 208 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 GZMHP20718 246 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 BLVRBP30043 206 aaPredicted RBP13.73□□□□□ -0.21
CCDC38-203ENST00000546803 GLP1RP43220 463 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 HILS1P60008 231 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 PRB3Q04118 309 aaPredicted RBP13.73□□□□□ -0.21
CCDC38-203ENST00000546803 MIDNQ504T8 468 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 NKAPLQ5M9Q1 402 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 OR52W1Q6IF63 320 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 SFXN4Q6P4A7 337 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 ZNF782Q6ZMW2 699 aaPredicted RBP13.73□□□□□ -0.21
CCDC38-203ENST00000546803 GAPTQ8N292 157 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 OR13A1Q8NGR1 328 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 PTX4Q96A99 478 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 FUNDC2Q9BWH2 189 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 PRDM13Q9H4Q3 707 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 LINC00574Q9H8X3 128 aa13.73□□□□□ -0.21
CCDC38-203ENST00000546803 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 CDK2P24941 298 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 ALDH3B2P48448 385 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 MXD1Q05195 221 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 C17orf58Q2M2W7 97 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 PNKDQ8N490 385 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 SIGLECL1Q8N7X8 197 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 OR11H6Q8NGC7 330 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 OR56B1Q8NGI3 324 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 ZNF48Q96MX3 618 aaPredicted RBP13.72□□□□□ -0.21
CCDC38-203ENST00000546803 NICN1Q9BSH3 213 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 PLEKHJ1Q9NW61 149 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 FAM96BQ9Y3D0 163 aa13.72□□□□□ -0.21
CCDC38-203ENST00000546803 A0A0A6YYD4 124 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 UBE2QL1A1L167 161 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 IL1AP01583 271 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 TFAP2AP05549 437 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 SLC2A2P11168 524 aaPredicted RBP13.71□□□□□ -0.21
CCDC38-203ENST00000546803 COX7A1P24310 79 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 SAA4P35542 130 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 SCAND1P57086 179 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 DEFB112Q30KQ8 113 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 CROCCP3Q8IVE0 287 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 MRGPRDQ8TDS7 321 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 ZDHHC16Q969W1 377 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 TMEM133Q9H2Q1 129 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 CALYQ9NYX4 217 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 DAPK2Q9UIK4 370 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 TRAPPC2LQ9UL33 140 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 HSF4Q9ULV5 492 aa13.71□□□□□ -0.21
CCDC38-203ENST00000546803 SOX21Q9Y651 276 aaPredicted RBP13.71□□□□□ -0.21
CCDC38-203ENST00000546803 A0A0U1RQK1 487 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 A0A1W2PRD5 423 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 A0A1W2PRF3 423 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 A0A1W2PRM7 423 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 MEIOCA2RUB1 952 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 METTL21EPA6NDL7 271 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 NPIPB11E5RHQ5 1161 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 SOCS1O15524 211 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 ORC5O43913 435 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 MMP23AO75900 390 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 FBP1P09467 338 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 CLEC2LP0C7M8 214 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 CD34P28906 385 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 VEGFCP49767 419 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 LGALS4P56470 323 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
CCDC38-203ENST00000546803 C6orf183Q5T699 404 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 PRAMEF5Q5TYX0 476 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 TRAT1Q6PIZ9 186 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 GPR141Q7Z602 305 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 RTN4RL2Q86UN3 420 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 SULT4A1Q9BR01 284 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 FAAP24Q9BTP7 215 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 CLEC7AQ9BXN2 247 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 RIMS4Q9H426 269 aaPredicted RBP13.7□□□□□ -0.22
CCDC38-203ENST00000546803 RAB9BQ9NP90 201 aa13.7□□□□□ -0.22
CCDC38-203ENST00000546803 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 A0A087X0M5 115 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 A0A0B4J203 849 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 A0A1B0GX30 115 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 FOXI3A8MTJ6 420 aaPredicted RBP13.69□□□□□ -0.22
CCDC38-203ENST00000546803 VENTXO95231 258 aa13.69□□□□□ -0.22
CCDC38-203ENST00000546803 PAHP00439 452 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms