RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 CGB3P0DN86 165 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 CGB7P0DN87 165 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 MGMTP16455 207 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 CD34P28906 385 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 GLP1RP43220 463 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 RAG2P55895 527 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 RPS25P62851 125 aaKnown RBP13.18□□□□□ -0.3
CIT-212ENST00000543239 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
CIT-212ENST00000543239 C1orf100Q5SVJ3 147 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 MINOS1Q5TGZ0 78 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 PRAMEF5Q5TYX0 476 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 LHFPL4Q7Z7J7 247 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
CIT-212ENST00000543239 CST11Q9H112 138 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 ZNF581Q9P0T4 197 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 RCC2Q9P258 522 aaKnown RBP13.18□□□□□ -0.3
CIT-212ENST00000543239 MINOS1-NBL1R4GNA1 71 aa13.18□□□□□ -0.3
CIT-212ENST00000543239 A0A087X0M5 115 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 A0A1B0GX30 115 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 H3BUI4 141 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 CD37P11049 281 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
CIT-212ENST00000543239 GABRA5P31644 462 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 RELBQ01201 579 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 C17orf58Q2M2W7 97 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 TMEM91Q6ZNR0 172 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 LINC00574Q9H8X3 128 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 BEX1Q9HBH7 125 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 CALYQ9NYX4 217 aa13.17□□□□□ -0.3
CIT-212ENST00000543239 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 CRTAPO75718 401 aaPredicted RBP13.16□□□□□ -0.3
CIT-212ENST00000543239 IL1AP01583 271 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 OMGP23515 440 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 GDNFP39905 211 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 EMX1Q04741 257 aaPredicted RBP13.16□□□□□ -0.3
CIT-212ENST00000543239 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
CIT-212ENST00000543239 LDLRAD2Q5SZI1 272 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 DHRS7BQ6IAN0 325 aaPredicted RBP13.16□□□□□ -0.3
CIT-212ENST00000543239 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 ABHD12Q8N2K0 398 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 OR10A7Q8NGE5 316 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 OR4P4Q8NGL7 312 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
CIT-212ENST00000543239 KIRREL1Q96J84 757 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 Q96M66 194 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 SELENOIQ9C0D9 397 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 BANF2Q9H503 90 aa13.16□□□□□ -0.3
CIT-212ENST00000543239 MCRIP1C9JLW8 97 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 NPIPB11E5RHQ5 1161 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 SLC22A1O15245 554 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 IGLV1-47P01700 117 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 GLAP06280 429 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 HTR1DP28221 377 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 HTR2CP28335 458 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 DYNLT3P51808 116 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 FABP5Q01469 135 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 SSX2Q16385 188 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 DYNAPQ8N1N2 210 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 OR6M1Q8NGM8 313 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 NEK7Q8TDX7 302 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 RAB18Q9NP72 206 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 NDUFB11Q9NX14 153 aa13.15□□□□□ -0.3
CIT-212ENST00000543239 CLPSL1A2RUU4 121 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 CA11O75493 328 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 GZMHP20718 246 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 FUT3P21217 361 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 PAX6P26367 422 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 SSX1Q16384 188 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 BAIAP2L2Q6UXY1 529 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 ZNF497Q6ZNH5 498 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 NDNFQ8TB73 568 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 MRGPRDQ8TDS7 321 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 CREB3L1Q96BA8 519 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 ZNF286AQ9HBT8 521 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 ABCB10Q9NRK6 738 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 IDI2-AS1Q9NZ38 188 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 LRRC42Q9Y546 428 aa13.14□□□□□ -0.31
CIT-212ENST00000543239 TSPAN9O75954 239 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 BPNT1O95861 308 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 MPIG6BO95866 241 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 VSIG8P0DPA2 414 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 NFYBP25208 207 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
CIT-212ENST00000543239 RANBP1P43487 201 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 PRRX1P54821 245 aa13.13□□□□□ -0.31
CIT-212ENST00000543239 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms