RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 MEP1BQ16820 701 aa9.83□□□□□ -0.84
CDH4-201ENST00000543233 KIF26BQ2KJY2 2108 aa9.83□□□□□ -0.84
CDH4-201ENST00000543233 ATG4DQ86TL0 474 aaPredicted RBP9.83□□□□□ -0.84
CDH4-201ENST00000543233 C9orf40Q8IXQ3 194 aa9.83□□□□□ -0.84
CDH4-201ENST00000543233 KIAA1456Q9P272 454 aa9.83□□□□□ -0.84
CDH4-201ENST00000543233 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
CDH4-201ENST00000543233 VDAC3Q9Y277 283 aa9.83□□□□□ -0.84
CDH4-201ENST00000543233 PRRC2CQ9Y520 2896 aaKnown RBP9.83□□□□□ -0.84
CDH4-201ENST00000543233 IGHV1OR21-1A0A087WYE8 117 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 NUPR1O60356 82 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 TACSTD2P09758 323 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 NIT1Q86X76 327 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 FAM89BQ8N5H3 189 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 LIPHQ8WWY8 451 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 AMELYQ99218 206 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 GPR27Q9NS67 375 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 ZNF586Q9NXT0 402 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 EHFQ9NZC4 300 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 FRRS1LQ9P0K9 344 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 SLC5A6Q9Y289 635 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 WIPI2Q9Y4P8 454 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 LRP4O75096 1905 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 A0A1W2PRS3 328 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 MAP1LC3B2A6NCE7 125 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 LILRA5A6NI73 299 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 SLC17A2O00624 439 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 IGLV3-19P01714 112 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 OMGP23515 440 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 MC5RP33032 325 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 IGLV3-21P80748 117 aaPredicted RBP9.82□□□□□ -0.84
CDH4-201ENST00000543233 OR52L2PQ8NGH6 319 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 TSPAN32Q96QS1 320 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 VN1R1Q9GZP7 353 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 MAP1LC3BQ9GZQ8 125 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 COPS7AQ9UBW8 275 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 ICAM5Q9UMF0 924 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 HSPB1P04792 205 aaKnown RBP9.82□□□□□ -0.84
CDH4-201ENST00000543233 LINC01590Q5TEZ4 76 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 TEX43Q6ZNM6 134 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 SLC25A45Q8N413 288 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 HOXB13Q92826 284 aaPredicted RBP9.82□□□□□ -0.84
CDH4-201ENST00000543233 STARD4Q96DR4 205 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 CDX2Q99626 313 aaPredicted RBP9.82□□□□□ -0.84
CDH4-201ENST00000543233 NICN1Q9BSH3 213 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 C5orf66Q9H5L9 145 aa9.82□□□□□ -0.84
CDH4-201ENST00000543233 H0YIG0 161 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 K7N7A8 449 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 OR7C2O60412 319 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 DBHP09172 617 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 S100GP29377 79 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 NXPH1P58417 271 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 FAM3BP58499 235 aaPredicted RBP9.81□□□□□ -0.84
CDH4-201ENST00000543233 TPPP2P59282 170 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDH4-201ENST00000543233 ZNF721Q8TF20 911 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 SLC46A1Q96NT5 459 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 ZNF703Q9H7S9 590 aaPredicted RBP9.81□□□□□ -0.84
CDH4-201ENST00000543233 PLSCR4Q9NRQ2 329 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 GTF3C1Q12789 2109 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 H3BML4 177 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 DUX1O43812 170 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 DEDDO75618 318 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 GNB3P16520 340 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 IL11P20809 199 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 PDLIM4P50479 330 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 SPOCK1Q08629 439 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 PNRC1Q12796 327 aaPredicted RBP9.81□□□□□ -0.84
CDH4-201ENST00000543233 RTP5Q14D33 572 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 EXT1Q16394 746 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 Q6ZWC4 215 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 D2HGDHQ8N465 521 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 DNASE2BQ8WZ79 361 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 TMEM230Q96A57 120 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 C8orf44Q96CB5 159 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 ELL3Q9HB65 397 aaPredicted RBP9.81□□□□□ -0.84
CDH4-201ENST00000543233 ZNF160Q9HCG1 818 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 PLA2G3Q9NZ20 509 aa9.81□□□□□ -0.84
CDH4-201ENST00000543233 MRM2Q9UI43 246 aaKnown RBP9.81□□□□□ -0.84
CDH4-201ENST00000543233 FER1L5A0AVI2 2057 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 SLC16A7O60669 478 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 MMP23AO75900 390 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 PNMTP11086 282 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 GLB1P16278 677 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 GABRA2P47869 451 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 CLDN18P56856 261 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 ARF1P84077 181 aaKnown RBP9.8□□□□□ -0.84
CDH4-201ENST00000543233 ABHD12BQ7Z5M8 362 aaPredicted RBP9.8□□□□□ -0.84
CDH4-201ENST00000543233 ZNF440Q8IYI8 595 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 TMEM186Q96B77 213 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 EML5Q05BV3 1969 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 ARPC3O15145 178 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 SLC25A17O43808 307 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 GP1BBP13224 206 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 SCAND1P57086 179 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 FBXW4P57775 412 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 CNN3Q15417 329 aaKnown RBP9.8□□□□□ -0.84
CDH4-201ENST00000543233 ADGRE4PQ86SQ3 457 aa9.8□□□□□ -0.84
CDH4-201ENST00000543233 PLXDC1Q8IUK5 500 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms