RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TRMT10AQ8TBZ6 339 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 ZNF596Q8TC21 504 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 DYNC2LI1Q8TCX1 351 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 APH1BQ8WW43 257 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 RNF166Q96A37 237 aaPredicted RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 NOL4LQ96MY1 436 aaPredicted RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 TTTY10Q9BZA0 68 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 CHST5Q9GZS9 411 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 AMBNQ9NP70 447 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 AKIP1Q9NQ31 210 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 RBFOX1Q9NWB1 397 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 FKBP14Q9NWM8 211 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 TAS2R3Q9NYW6 316 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 CNOT2Q9NZN8 540 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 ZMAT5Q9UDW3 170 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 OR52A1Q9UKL2 312 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.75□□□□□ -1.49
YBX3-209ENST00000540747 SORL1Q92673 2214 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 ALMS1Q8TCU4 4167 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 IGKV1-9A0A0C4DH69 117 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 LOC100506127A0A0U1RQW1 187 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 LCE6AA0A183 80 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 PNMA8CA0A1B0GUJ8 204 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 FAM230AA0A1W2PPH8 454 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 FUOMA2VDF0 154 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 ZAR1LA6NP61 321 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 FGF16O43320 207 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 IGHG2P01859 326 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CSN2P05814 226 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 HSMCR30P0CW71 290 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 GABRR1P24046 479 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 GADD45AP24522 165 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CHATP28329 748 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 DUSP1P28562 367 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CD40LGP29965 261 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 C21orf33P30042 268 aaPredicted RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 SOX6P35712 828 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 PSMD7P51665 324 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 FUT6P51993 359 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 PPP5CP53041 499 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 RPS7P62081 194 aaKnown RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 SNRPGP62308 76 aaKnown RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 FHL3Q13643 280 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 SNAPC1Q16533 368 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 C17orf58Q2M2W7 97 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 SPIN3Q5JUX0 258 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 AADACL4Q5VUY2 407 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 MEDAGQ5VYS4 303 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 SLX4IPQ5VYV7 408 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 UNQ9370/PRO34162Q6UXP9 181 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 SSX6Q7RTT6 188 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CATSPERDQ86XM0 798 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 ZNF695Q8IW36 515 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 Q8IYB0 196 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 FAM58AQ8N1B3 248 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 COMMD1Q8N668 190 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 KLHL30-AS1Q8NEE0 82 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 DNAAF1Q8NEP3 725 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 MUC7Q8TAX7 377 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CAPSLQ8WWF8 208 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 EMG1Q92979 244 aaKnown RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 CREB3L1Q96BA8 519 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 COQ2Q96H96 371 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 TMEM80Q96HE8 168 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 PRR25Q96S07 402 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CNN2Q99439 309 aaKnown RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 MNTQ99583 582 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 GAL3ST2Q9H3Q3 398 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 LINC00574Q9H8X3 128 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 ADGRL4Q9HBW9 690 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 CHCHD3Q9NX63 227 aaKnown RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 IKZF2Q9UKS7 526 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 SLC7A11Q9UPY5 501 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 RPL36Q9Y3U8 105 aaKnown RBP5.74□□□□□ -1.49
YBX3-209ENST00000540747 PEX16Q9Y5Y5 336 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 A3GALT2U3KPV4 340 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 HERC2O95714 4834 aa5.74□□□□□ -1.49
YBX3-209ENST00000540747 TRGV10A0A0A0MS01 117 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 IGKV1-12A0A0C4DH73 117 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 IRGMA1A4Y4 181 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 ODAMA1E959 279 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 FAM172BPA6NC97 362 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 METTL15A6NJ78 407 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 LINC01548A6NM66 108 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 SNTNA6NMZ2 147 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 CCL24O00175 119 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 PRKYO43930 277 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 GATBO75879 557 aaKnown RBP5.73□□□□□ -1.49
YBX3-209ENST00000540747 OR2H2O95918 312 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 IGKV1D-12P01611 117 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 GABRB1P18505 474 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 BCL3P20749 454 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 CEACAM3P40198 252 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 GLIPR1P48060 266 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 ARHGDIBP52566 201 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 ZNF45Q02386 682 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 CFHR3Q02985 330 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 EBI3Q14213 229 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 IRF3Q14653 427 aa5.73□□□□□ -1.49
YBX3-209ENST00000540747 OXA1LQ15070 435 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms