RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 JMJD7P0C870 316 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 NR2C1P13056 603 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 NPBWR2P48146 333 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 TMEM92Q6UXU6 159 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 PLPPR1Q8TBJ4 325 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 R3HDM4Q96D70 268 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 NAT8Q9UHE5 227 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 RNF115Q9Y4L5 304 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 PCDH15Q96QU1 1955 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 OR2J2O76002 312 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 PAX9P55771 341 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 ENDOGQ14249 297 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 CNN3Q15417 329 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 TMEM211Q6ICI0 200 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 LCN15Q6UWW0 184 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 Q6ZPA2 131 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 TDHQ8IZJ6 230 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 OSR2Q8N2R0 312 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 KLRF1Q9NZS2 232 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 RNF150Q9ULK6 438 aa16.03■□□□□ 0.16
SFSWAP-207ENST00000538548 MSX1P28360 303 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 SPIN3Q5JUX0 258 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 NCR3LG1Q68D85 454 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 C16orf82Q7Z2V1 217 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 MRGPRGQ86SM5 289 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 WDR5BQ86VZ2 330 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 GPR137CQ8N3F9 429 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 OR51G1Q8NGK1 321 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 THAP3Q8WTV1 239 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 TMEM170AQ8WVE7 144 aa16.02■□□□□ 0.16
SFSWAP-207ENST00000538548 C10orf142B7Z368 130 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 PDCD6O75340 191 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 CCKARP32238 428 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 FAM3BP58499 235 aaPredicted RBP16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 ERVFC1-1P60608 527 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 ADIRFQ15847 76 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 SNAI3Q3KNW1 292 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 ACSF3Q4G176 576 aaPredicted RBP16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 AGMATQ9BSE5 352 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 SLC7A10Q9NS82 523 aa16.02■□□□□ 0.15
SFSWAP-207ENST00000538548 IGHV3-20A0A0C4DH32 117 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 OR4A8P0C604 315 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 NUBP1P53384 320 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 HIST1H3AP68431 136 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 MALLQ13021 153 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 CYB5R2Q6BCY4 276 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 CYP2G1PQ6ZSU1 146 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 BORCS8Q96FH0 119 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 ST3GAL6Q9Y274 331 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 LOC102725191A0A1B0GVB3 256 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 CEBPZOSA8MTT3 80 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 SLC33A1O00400 549 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 IFNA1P01562 189 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 HLA-HP01893 362 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 UCP1P25874 307 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 CTHP32929 405 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 CLDN17P56750 224 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 PMS2P11Q13670 270 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 ZNF726P1Q15940 193 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 RSPO4Q2I0M5 234 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 LHFPL2Q6ZUX7 228 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 SPTSSAQ969W0 71 aa16.01■□□□□ 0.15
SFSWAP-207ENST00000538548 TCRBV21S2A2A0A5A6 115 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 AQP7P3A6NL99 342 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 FGF5P12034 268 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 TUBG1P23258 451 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 TDGF1P3P51864 188 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 RNF138Q8WVD3 245 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 ZNF845Q96IR2 970 aaPredicted RBP16■□□□□ 0.15
SFSWAP-207ENST00000538548 OR5B12Q96R08 314 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 SMIM7Q9BQ49 75 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 Q9N2K0 584 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 PRSS50Q9UI38 385 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 IGKV1-12A0A0C4DH73 117 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 NXPH3O95157 252 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 IGKV1D-12P01611 117 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 TCN2P20062 427 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 FGF8P55075 233 aaPredicted RBP16■□□□□ 0.15
SFSWAP-207ENST00000538548 MRPS34P82930 218 aaKnown RBP16■□□□□ 0.15
SFSWAP-207ENST00000538548 SHBQ15464 509 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 C10orf128Q5T292 105 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 CENPVQ7Z7K6 275 aaPredicted RBP16■□□□□ 0.15
SFSWAP-207ENST00000538548 MRPL41Q8IXM3 137 aaKnown RBP16■□□□□ 0.15
SFSWAP-207ENST00000538548 OR1L3Q8NH93 324 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 NAT6Q93015 286 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 PSMG3Q9BT73 122 aaPredicted RBP16■□□□□ 0.15
SFSWAP-207ENST00000538548 RSG1Q9BU20 258 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 CBLN4Q9NTU7 201 aa16■□□□□ 0.15
SFSWAP-207ENST00000538548 GABRG2P18507 467 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 GZMHP20718 246 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 GALR1P47211 349 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 IDH3GP51553 393 aaPredicted RBP15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 TMEM241Q24JQ0 296 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 TEX38Q6PEX7 206 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 ZNF818PQ6ZRF7 136 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 SCGB1C1Q8TD33 95 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 NABP1Q96AH0 204 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 VSIRQ9H7M9 311 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 ZNF442Q9H7R0 627 aa15.99■□□□□ 0.15
SFSWAP-207ENST00000538548 PLEK2Q9NYT0 353 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms