RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 IGHV2OR16-5A0A0B4J2B6 119 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 MEGF11A6BM72 1044 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 ST8SIA3O43173 380 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 OR6A2O95222 327 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 HRASP01112 189 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 CTRLP40313 264 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 RPL15P61313 204 aaKnown RBP9.25□□□□□ -0.93
RTN3-208ENST00000537981 RPL19P84098 196 aaKnown RBP9.25□□□□□ -0.93
RTN3-208ENST00000537981 EXT1Q16394 746 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 PRICKLE4Q2TBC4 344 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 SPATA45Q537H7 98 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 CXorf66Q5JRM2 361 aaPredicted RBP9.25□□□□□ -0.93
RTN3-208ENST00000537981 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 SLC22A24Q8N4F4 322 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 KCNG3Q8TAE7 436 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 CMTM2Q8TAZ6 248 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 VN1R3Q9BXE9 311 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 ELL3Q9HB65 397 aaPredicted RBP9.25□□□□□ -0.93
RTN3-208ENST00000537981 PATZ1Q9HBE1 687 aaKnown RBP9.25□□□□□ -0.93
RTN3-208ENST00000537981 CENPMQ9NSP4 180 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 MED12Q93074 2177 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 MAP1LC3B2A6NCE7 125 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 SAP30O75446 220 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 SERF1AO75920 110 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 RENP00797 406 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 FRMD6-AS1P0C7T7 363 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 SFTPDP35247 375 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 ARL3P36405 182 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 CD226Q15762 336 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 BSXQ3C1V8 233 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 CNKSR3Q6P9H4 555 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 TGIF2LYQ8IUE0 185 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 MRGPRX1Q96LB2 322 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 TMEM59Q9BXS4 323 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 MAP1LC3BQ9GZQ8 125 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 COA3Q9Y2R0 106 aaPredicted RBP9.24□□□□□ -0.93
RTN3-208ENST00000537981 R4GMQ9 66 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 CTSDP07339 412 aaPredicted RBP9.24□□□□□ -0.93
RTN3-208ENST00000537981 TMEM225BP0DP42 221 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 TCN2P20062 427 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 ROM1Q03395 351 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 MESP2Q0VG99 397 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 IL13RA2Q14627 380 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 PDGFRLQ15198 375 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 FAM78BQ5VT40 261 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 SLC8B1Q6J4K2 584 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 C6orf201Q7Z4U5 140 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 ZNF295-AS1Q8N0V1 137 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 TMEM252Q8N6L7 170 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 OR8G5Q8NG78 346 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 OR2M3Q8NG83 312 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 OR2T10Q8NGZ9 312 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 OR52N5Q8NH56 324 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 RBMXL1Q96E39 390 aaKnown RBP9.24□□□□□ -0.93
RTN3-208ENST00000537981 LINC00615Q96LM1 132 aaPredicted RBP9.24□□□□□ -0.93
RTN3-208ENST00000537981 ATP5SQ99766 215 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 WNT10AQ9GZT5 417 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 CTDSP1Q9GZU7 261 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 CISD1Q9NZ45 108 aaKnown RBP9.24□□□□□ -0.93
RTN3-208ENST00000537981 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
RTN3-208ENST00000537981 CPAMD8Q8IZJ3 1885 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 IGKV1D-43A0A0B4J1Z2 117 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 TRAV39A0A0B4J263 110 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 TTRP02766 147 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 OPRM1P35372 400 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 VIPR2P41587 438 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 RSPO4Q2I0M5 234 aaPredicted RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 FAM57BQ71RH2 274 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 ERN2Q76MJ5 926 aaKnown RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 OR4D5Q8NGN0 318 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 RTN4IP1Q8WWV3 396 aaPredicted RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 BCL2L2Q92843 193 aaPredicted RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 SCGB3A2Q96PL1 93 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 HIPK2Q9H2X6 1198 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 Q9N2K0 584 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 IGLV1-36A0A0B4J1U3 117 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 VSTM2BA6NLU5 285 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 PITX3O75364 302 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 CYC1P08574 325 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 EGR1P18146 543 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 BMP5P22003 454 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 HSD11B1P28845 292 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 KRTDAPP60985 99 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 ACOT6Q3I5F7 207 aaPredicted RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 H1FOOQ8IZA3 346 aaPredicted RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 OR10G4Q8NGN3 311 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 OVCA2Q8WZ82 227 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 GPR146Q96CH1 333 aa9.23□□□□□ -0.93
RTN3-208ENST00000537981 MSI2Q96DH6 328 aaKnown RBP9.23□□□□□ -0.93
RTN3-208ENST00000537981 C18orf12Q96KH6 178 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms