RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 E9PI62 339 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 GLIPR1P48060 266 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 LY6EQ16553 131 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 DDI2Q5TDH0 399 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 IZUMO1Q8IYV9 350 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 RGP1Q92546 391 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-217ENST00000534699 PDCD1LG2Q9BQ51 273 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 OCSTAMPQ9BR26 566 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 DCLRE1BQ9H816 532 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 TRAV24A0A0B4J272 114 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 J3QR06 171 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 PSMA1P25786 263 aaKnown RBP8.34□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF137PP52743 207 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 GP2P55259 537 aaKnown RBP8.34□□□□□ -1.07
CSDE1-217ENST00000534699 WNT4P56705 351 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 AESQ08117 197 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 MADCAM1Q13477 382 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 UNQ9370/PRO34162Q6UXP9 181 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 MYDGFQ969H8 173 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 KIRREL1Q96J84 757 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 DPCDQ9BVM2 203 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-217ENST00000534699 TAS2R4Q9NYW5 299 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 MOB4Q9Y3A3 225 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 PEX14O75381 377 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 SC5DO75845 299 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 DMRTC1Q5HYR2 192 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 C17orf50Q8WW18 174 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 GGHQ92820 318 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 CHST6Q9GZX3 395 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 VCX3BQ9H321 246 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 GHITMQ9H3K2 345 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF286AQ9HBT8 521 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 MGAT4AQ9UM21 535 aa8.34□□□□□ -1.07
CSDE1-217ENST00000534699 MYL12BO14950 172 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 HTR3BO95264 441 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 GAPDHP04406 335 aaKnown RBP8.33□□□□□ -1.08
CSDE1-217ENST00000534699 CCBE1Q6UXH8 406 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-217ENST00000534699 NANOGP1Q8N7R0 232 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 GHSRQ92847 366 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 RPEQ96AT9 228 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 PGLYRP3Q96LB9 341 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 MND1Q9BWT6 205 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 ZFP57Q9NU63 452 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 SCN3BQ9NY72 215 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 IL36RNQ9UBH0 155 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 ING4Q9UNL4 249 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 ST3GAL6Q9Y274 331 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 ERGIC3Q9Y282 383 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 MEIKINA0A087WXM9 373 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 BPNT1O95861 308 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 CD83Q01151 205 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 ST3GAL4Q11206 333 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 SAMD5Q5TGI4 173 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 PRAMEF5Q5TYX0 476 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 FAM71F2Q6NXP2 309 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 SUMF2Q8NBJ7 301 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 WFDC9Q8NEX5 89 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 CYGBQ8WWM9 190 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 TOMM40LQ969M1 308 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 RFT1Q96AA3 541 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 SLC25A33Q9BSK2 321 aa8.33□□□□□ -1.08
CSDE1-217ENST00000534699 MCRIP1C9JLW8 97 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 CD1BP29016 333 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 HSPA13P48723 471 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 DCTN2Q13561 401 aaKnown RBP8.32□□□□□ -1.08
CSDE1-217ENST00000534699 ZNF497Q6ZNH5 498 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 SATL1Q86VE3 508 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 OR4X2Q8NGF9 303 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 CST11Q9H112 138 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 RIMS4Q9H426 269 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-217ENST00000534699 KIF25Q9UIL4 384 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 TSSC4Q9Y5U2 329 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-217ENST00000534699 ITGB1BP1O14713 200 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 MRPS14O60783 128 aaKnown RBP8.32□□□□□ -1.08
CSDE1-217ENST00000534699 TSPAN15O95858 294 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 DUSP1P28562 367 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 DLX1P56177 255 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 RPS11P62280 158 aaKnown RBP eCLIP8.32□□□□□ -1.08
CSDE1-217ENST00000534699 LDLRAD2Q5SZI1 272 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 LYPD6Q86Y78 171 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 CHPT1Q8WUD6 406 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 DERL3Q96Q80 235 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 AMBNQ9NP70 447 aa8.32□□□□□ -1.08
CSDE1-217ENST00000534699 SPINT2O43291 252 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 KCNAB3O43448 404 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 RGS11O94810 467 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 CLIC3O95833 236 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 RCN1Q15293 331 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 ARSJQ5FYB0 599 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-217ENST00000534699 C1orf100Q5SVJ3 147 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 GLT8D1Q68CQ7 371 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 TFAP2CQ92754 450 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 ZNF184Q99676 751 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-217ENST00000534699 CENPOQ9BU64 300 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 MRPS28Q9Y2Q9 187 aaKnown RBP8.31□□□□□ -1.08
CSDE1-217ENST00000534699 TPRKBQ9Y3C4 175 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms