RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 PRKACAP17612 351 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 PSMA1P25786 263 aaKnown RBP10.1□□□□□ -0.79
USF1-211ENST00000534633 RAB13P51153 203 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 DYNLT3P51808 116 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 SNU13P55769 128 aaKnown RBP10.1□□□□□ -0.79
USF1-211ENST00000534633 LOXL3P58215 753 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 TRAM1Q15629 374 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 NEDD8Q15843 81 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 HSD17B12Q53GQ0 312 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 CCBE1Q6UXH8 406 aaPredicted RBP10.1□□□□□ -0.79
USF1-211ENST00000534633 TMEM219Q86XT9 240 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 OR51T1Q8NGJ9 327 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 FCGR1BQ92637 280 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 THRSPQ92748 146 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 MUL1Q969V5 352 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 GPER1Q99527 375 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 WNT10AQ9GZT5 417 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 RHOFQ9HBH0 211 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 GSTK1Q9Y2Q3 226 aa10.1□□□□□ -0.79
USF1-211ENST00000534633 A0A087WXM4 84 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 ADARB2-AS1A8MUL3 147 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 OR2H2O95918 312 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 HAND1O96004 215 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 CHRM2P08172 466 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 IGHV1-8P0DP01 117 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 LMO1P25800 156 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 SSX2Q16385 188 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 SPIN3Q5JUX0 258 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 C1orf100Q5SVJ3 147 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 LDLRAD2Q5SZI1 272 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 JAGN1Q8N5M9 183 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 ASCC1Q8N9N2 400 aaKnown RBP10.09□□□□□ -0.79
USF1-211ENST00000534633 CYYR1Q96J86 154 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
USF1-211ENST00000534633 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 IL36GQ9NZH8 169 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 ING4Q9UNL4 249 aa10.09□□□□□ -0.79
USF1-211ENST00000534633 AK6Q9Y3D8 172 aaKnown RBP10.09□□□□□ -0.79
USF1-211ENST00000534633 F2RL2O00254 374 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 HTR3BO95264 441 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 SMIM18P0DKX4 95 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 JUNBP17275 347 aaPredicted RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 CALRP27797 417 aaKnown RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 MTNR1BP49286 362 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 EDDM3BP56851 147 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 MEF2CQ06413 473 aaPredicted RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 PIGYQ3MUY2 71 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 MINOS1Q5TGZ0 78 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 GLIPR1L1Q6UWM5 242 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 GDPD3Q7L5L3 318 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 NR2C2APQ86WQ0 139 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 OR8H2Q8N162 312 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 NKAIN3Q8N8D7 197 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 TMEM104Q8NE00 496 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 PHF21AQ96BD5 680 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 CPNE2Q96FN4 548 aaPredicted RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 ZNF714Q96N38 554 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 UQCC2Q9BRT2 126 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 METTL9Q9H1A3 318 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 OR51E2Q9H255 320 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 MRPS28Q9Y2Q9 187 aaKnown RBP10.08□□□□□ -0.8
USF1-211ENST00000534633 MINOS1-NBL1R4GNA1 71 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 DNAH3Q8TD57 4116 aa10.08□□□□□ -0.8
USF1-211ENST00000534633 KIAA2026Q5HYC2 2103 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 TRAV24A0A0B4J272 114 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 SIRPB1O00241 398 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 SLC33A1O00400 549 aaPredicted RBP10.07□□□□□ -0.8
USF1-211ENST00000534633 SH2D1BO14796 132 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 SLC22A1O15245 554 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 ARL6IP5O75915 188 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 GALP22466 123 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 FGF9P31371 208 aaPredicted RBP10.07□□□□□ -0.8
USF1-211ENST00000534633 VDAC2P45880 294 aaPredicted RBP10.07□□□□□ -0.8
USF1-211ENST00000534633 OR3A1P47881 315 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 DYNC1I2Q13409 638 aaKnown RBP10.07□□□□□ -0.8
USF1-211ENST00000534633 RSU1Q15404 277 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 NHLRC3Q5JS37 347 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 C22orf42Q6IC83 251 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 SNX22Q96L94 193 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 NR1H4Q96RI1 486 aaPredicted RBP10.07□□□□□ -0.8
USF1-211ENST00000534633 CHST6Q9GZX3 395 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 RNF167Q9H6Y7 350 aa10.07□□□□□ -0.8
USF1-211ENST00000534633 TXNL4BQ9NX01 149 aaKnown RBP10.07□□□□□ -0.8
USF1-211ENST00000534633 TRAV1-2A0A0B4J238 106 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 hADV38S2A0JD32 116 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 MEX3AA1L020 520 aaKnown RBP10.06□□□□□ -0.8
USF1-211ENST00000534633 H3BUI4 141 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 GEMIN2O14893 280 aaKnown RBP10.06□□□□□ -0.8
USF1-211ENST00000534633 DEGS1O15121 323 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 CD36P16671 472 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 SERPINA2P20848 420 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 GADD45AP24522 165 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 OR10A3P58181 314 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 BLCAPP62952 87 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 QRFPP83859 136 aa10.06□□□□□ -0.8
USF1-211ENST00000534633 CD83Q01151 205 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms