RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 MS4A15Q8N5U1 240 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 PNLDC1Q8NA58 520 aaKnown RBP6.33□□□□□ -1.4
CASP4-212ENST00000533730 DEFB108BQ8NET1 73 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 OR4M2Q8NGB6 313 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 OR51A4Q8NGJ6 313 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 OR13C9Q8NGT0 318 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 OR10AC1Q8NH08 325 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 TRMT10AQ8TBZ6 339 aaKnown RBP6.33□□□□□ -1.4
CASP4-212ENST00000533730 NPRL2Q8WTW4 380 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 ZFAND2BQ8WV99 257 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 TMEM106AQ96A25 262 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 TMEM18Q96B42 140 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 TMIGD2Q96BF3 282 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 MED30Q96HR3 178 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 CCDC90BQ9GZT6 254 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 RHOFQ9HBH0 211 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 ISYNA1Q9NPH2 558 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 PAK1IP1Q9NWT1 392 aaPredicted RBP6.33□□□□□ -1.4
CASP4-212ENST00000533730 KAAG1Q9UBP8 84 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 CKLFQ9UBR5 152 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 CLN8Q9UBY8 286 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 OR5V1Q9UGF6 321 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 ACANP16112 2415 aa6.33□□□□□ -1.4
CASP4-212ENST00000533730 IGKV1-9A0A0C4DH69 117 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 TRBV5-5A0A0J9YX44 114 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 AKR7A2O43488 359 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 RHBDL1O75783 438 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 NXPH2O95156 264 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 ECDO95905 644 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 RLN1P04808 185 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 ALDOBP05062 364 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 HCKP08631 526 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 PSMA1P25786 263 aaKnown RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 TRAM1Q15629 374 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 DMRTC1Q5HYR2 192 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 STUMQ69YW2 141 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 FIP1L1Q6UN15 594 aaKnown RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 SAXO1Q8IYX7 474 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 Q8N1X5 172 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 ZSCAN4Q8NAM6 433 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 OSR1Q8TAX0 266 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 RGP1Q92546 391 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 UFD1Q92890 307 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 PGLYRP3Q96LB9 341 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 CEP19Q96LK0 163 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 NRIP2Q9BQI9 281 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 SHARPINQ9H0F6 387 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 METTL17Q9H7H0 456 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 SEBOXQ9HB31 216 aaPredicted RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 TMEM138Q9NPI0 162 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 HIF1ANQ9NWT6 349 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 LSM2Q9Y333 95 aaKnown RBP6.32□□□□□ -1.4
CASP4-212ENST00000533730 ABCA1O95477 2261 aa6.32□□□□□ -1.4
CASP4-212ENST00000533730 YLPM1P49750 1951 aaKnown RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 IGHV3OR15-7A0A075B7D8 119 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 C5orf52A6NGY3 159 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 OR2AT4A6NND4 320 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ZNF879B4DU55 563 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 INAFM1C9JVW0 142 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 TRAPPC2LH3BP13 241 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 TNFRSF13BO14836 293 aaPredicted RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 NDUFB3O43676 98 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 SYNGR1O43759 233 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ENSAO43768 121 aaKnown RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 CRLF1O75462 422 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 GPX5O75715 221 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 NDUFB4O95168 129 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 GYPAP02724 150 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 LIPFP07098 398 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 POU3F4P49335 361 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 LUMP51884 338 aaPredicted RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 RIPPLY3P57055 190 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ERVK11-1P61568 191 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 RPS11P62280 158 aaKnown RBP eCLIP6.31□□□□□ -1.4
CASP4-212ENST00000533730 LCN2P80188 198 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 MLLT11Q13015 90 aaPredicted RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 PDZK1IP1Q13113 114 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 HNRNPA0Q13151 305 aaKnown RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 TPBGQ13641 420 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 KISS1Q15726 138 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 CHRFAM7AQ494W8 412 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 LRRC10Q5BKY1 277 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 WDR25Q64LD2 544 aaPredicted RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 LYPD2Q6UXB3 125 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 BTNL3Q6UXE8 466 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ACP7Q6ZNF0 438 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ZNF788Q6ZQV5 615 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 SLC25A26Q70HW3 274 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 Q71RC1 249 aaPredicted RBP6.31□□□□□ -1.4
CASP4-212ENST00000533730 ZNF367Q7RTV3 350 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ANGPTL5Q86XS5 388 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 CALHM1Q8IU99 346 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 CDH26Q8IXH8 852 aa6.31□□□□□ -1.4
CASP4-212ENST00000533730 ZFP41Q8N8Y5 198 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms