RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CTF1Q16619 201 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 KRBOX4Q5JUW0 171 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 RAB12Q6IQ22 244 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 NDNFQ8TB73 568 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 GCDHQ92947 438 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 NICN1Q9BSH3 213 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 BARHL1Q9BZE3 327 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 DCSTAMPQ9H295 470 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 C19orf12Q9NSK7 152 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 hADV38S2A0JD32 116 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 METTL21EPA6NDL7 271 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 PDCD6O75340 191 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 PAHP00439 452 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 HKR1P10072 659 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 CFPP27918 469 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 VEGFCP49767 419 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 P2RX3P56373 397 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 BLMHQ13867 455 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 RBM39Q14498 530 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 SLC9A3R2Q15599 337 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM189A2Q15884 450 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 DEFB112Q30KQ8 113 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 TMEM200BQ69YZ2 307 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 Q6YL49 198 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 TMEM86BQ8N661 226 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 OR56B1Q8NGI3 324 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 SLC25A46Q96AG3 418 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 TM2D1Q9BX74 207 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 LPAR5Q9H1C0 372 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 ATG5Q9H1Y0 275 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 IFT22Q9H7X7 185 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 PLEKHJ1Q9NW61 149 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 ETAA1Q9NY74 926 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 FBLN5Q9UBX5 448 aa10.61□□□□□ -0.71
TRAPPC4-212ENST00000533058 MEIKINA0A087WXM9 373 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 TRGV10A0A0A0MS01 117 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 RAB6AP20340 208 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 GLIPR1P48060 266 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 KCNJ3P48549 501 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 RORCP51449 518 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 EFNB2P52799 333 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 GUCA2AQ02747 115 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 FOXL1Q12952 345 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 PLA2G7Q13093 441 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 C16orf87Q6PH81 154 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 Q8N7P7 452 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 TNFRSF14Q92956 283 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 LHX4Q969G2 390 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 PHF21AQ96BD5 680 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 ISOC1Q96CN7 298 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 METTL8Q9H825 291 aaKnown RBP10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 KIF25Q9UIL4 384 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 POMT1Q9Y6A1 747 aa10.6□□□□□ -0.71
TRAPPC4-212ENST00000533058 FBN3Q75N90 2809 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 A0A075B6Q4 140 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 hCG_1809904A0A1W2PP81 198 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 A0A1W2PPE2 198 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 A0A1W2PR64 198 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 A0A1W2PRV1 198 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 TMEM30CPA0ZSE6 113 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 ODAMA1E959 279 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 LDLRAD4O15165 306 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 SOCS1O15524 211 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 CSN2P05814 226 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 CHATP28329 748 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 ERP29P30040 261 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 SOX6P35712 828 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 GLP1RP43220 463 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 ZNF273Q14593 569 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 SPCS2Q15005 226 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 NCR3LG1Q68D85 454 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 C6orf201Q7Z4U5 140 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 DYRK2Q92630 601 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 COQ2Q96H96 371 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAAP24Q9BTP7 215 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 ABRACLQ9P1F3 81 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 RCC2Q9P258 522 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 ETV7Q9Y603 341 aa10.59□□□□□ -0.71
TRAPPC4-212ENST00000533058 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 TMEM127O75204 238 aa10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 GLAP06280 429 aa10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 ZNF728P0DKX0 622 aa10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 CCL3L1P16619 93 aa10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 UBE2E1P51965 193 aa10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 RPL15P61313 204 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 MRPS15P82914 257 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-212ENST00000533058 RUSC1-AS1Q66K80 236 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms