RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 C6orf201Q7Z4U5 140 aa9.4□□□□□ -0.91
COLCA1-203ENST00000532918 TMEM37Q8WXS4 190 aa9.4□□□□□ -0.91
COLCA1-203ENST00000532918 RSRP1Q9BUV0 290 aa9.4□□□□□ -0.91
COLCA1-203ENST00000532918 IL17BQ9UHF5 180 aa9.4□□□□□ -0.91
COLCA1-203ENST00000532918 CNTRLQ7Z7A1 2325 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 TSPAN2O60636 221 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 ARG1P05089 322 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 CD200P41217 278 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 B2MP61769 119 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 OR1L6Q8NGR2 347 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 OR1L1Q8NH94 360 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 NXF2Q9GZY0 626 aaKnown RBP9.39□□□□□ -0.91
COLCA1-203ENST00000532918 SLC52A3Q9NQ40 469 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 IL19Q9UHD0 177 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 TRPM6Q9BX84 2022 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF716A6NP11 495 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 BCL3P20749 454 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 Q8WTZ3 238 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 CYB5R1Q9UHQ9 305 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 ORAI1Q96D31 301 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 ELOVL1Q9BW60 279 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 OR2J1Q9GZK6 312 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 UBE2L5PA0A1B0GUS4 154 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 A6NDN8 102 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 FOXH1O75593 365 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 SEMG1P04279 462 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 PMELP40967 661 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 RNF133Q8WVZ7 376 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 MARS2Q96GW9 593 aaKnown RBP9.39□□□□□ -0.91
COLCA1-203ENST00000532918 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 GP6Q9HCN6 339 aa9.39□□□□□ -0.91
COLCA1-203ENST00000532918 A0A1W2PNV4 684 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 B9A039 149 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 SCGB1A1P11684 91 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CLDN20P56880 219 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CCL8P80075 99 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 DGAT2L6Q6ZPD8 337 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 YIPF6Q96EC8 236 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CXorf58Q96LI9 332 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 RASL12Q9NYN1 266 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 PLEKHB1Q9UF11 243 aaPredicted RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 GAPDHP04406 335 aaKnown RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CELA2AP08217 269 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 PCOLCEQ15113 449 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 NRTNQ99748 197 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CITED2Q99967 270 aaPredicted RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF552Q9H707 407 aaPredicted RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CNTD2Q9H8S5 307 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 RHOFQ9HBH0 211 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 KNL1Q8NG31 2342 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 DEDDO75618 318 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 TMEM52Q8NDY8 209 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 ADAMTS17Q8TE56 1095 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 STARD10Q9Y365 291 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 AP4M1O00189 453 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 DCTDP32321 178 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 MMDQ15546 238 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF385AQ96PM9 386 aaKnown RBP9.38□□□□□ -0.91
COLCA1-203ENST00000532918 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
COLCA1-203ENST00000532918 CDC42EP2O14613 210 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 MGST3O14880 152 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 PRDX2P32119 198 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 LYZP61626 148 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 SLC38A11Q08AI6 406 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 GCSAMQ8N6F7 178 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 RNF167Q9H6Y7 350 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 MRM2Q9UI43 246 aaKnown RBP9.37□□□□□ -0.91
COLCA1-203ENST00000532918 ATAD5Q96QE3 1844 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 C9orf172C9J069 976 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 RNASEK-C17orf49H0YIS7 233 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 SOX15O60248 233 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 OR1K1Q8NGR3 316 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 TMEM218A2RU14 115 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 IGHA2P01877 340 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 SFTA3P0C7M3 94 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 RNASEKQ6P5S7 137 aaKnown RBP9.37□□□□□ -0.91
COLCA1-203ENST00000532918 GHITMQ9H3K2 345 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 GPR27Q9NS67 375 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF638Q14966 1978 aaKnown RBP9.37□□□□□ -0.91
COLCA1-203ENST00000532918 WNK3Q9BYP7 1800 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 UPK3AO75631 287 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 SLC25A5P05141 298 aaKnown RBP9.37□□□□□ -0.91
COLCA1-203ENST00000532918 GABRB1P18505 474 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 SURF2Q15527 256 aaPredicted RBP9.37□□□□□ -0.91
COLCA1-203ENST00000532918 TEX30Q5JUR7 227 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 CDCP2Q5VXM1 449 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 FDCSPQ8NFU4 85 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 MEGF10Q96KG7 1140 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms