RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	YIPF6	Q96EC8	236 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	SNX22	Q96L94	193 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	PCGF1	Q9BSM1	259 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	MRPS26	Q9BYN8	205 aa	Known RBP	6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	CST11	Q9H112	138 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	KCNK15	Q9H427	330 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	BANF2	Q9H503	90 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	SEBOX	Q9HB31	216 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	PCDHB16	Q9NRJ7	776 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	TNFRSF19	Q9NS68	423 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	ZNF581	Q9P0T4	197 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	ST3GAL6	Q9Y274	331 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	TRAV1-2	A0A0B4J238	106 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678		A0A0G2JK05	382 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	SLC17A2	O00624	439 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	MGST3	O14880	152 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	GEMIN2	O14893	280 aa	Known RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	DEGS1	O15121	323 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	SLC22A1	O15245	554 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	OR7C1	O76099	320 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	MPIG6B	O95866	241 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	LIPF	P07098	398 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	UBB	P0CG47	229 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	MGMT	P16455	207 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	RAB3B	P20337	219 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	MDK	P21741	143 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	PRTN3	P24158	256 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	LMO1	P25800	156 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	FGF9	P31371	208 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	CLDN12	P56749	244 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	RPL31	P62899	125 aa	Known RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	PAX8	Q06710	450 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	SRSF4	Q08170	494 aa	Known RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	ZNF273	Q14593	569 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	P2RY14	Q15391	338 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	SLC9A3R2	Q15599	337 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	RAB11B	Q15907	218 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	TAF9	Q16594	264 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	PAN3	Q58A45	887 aa	Known RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	HES5	Q5TA89	166 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	METTL11B	Q5VVY1	283 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	RUSC1-AS1	Q66K80	236 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	METAP1D	Q6UB28	335 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	RBMS3	Q6XE24	437 aa	Known RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	BRD3OS	Q6XYD6	125 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	TCF23	Q7RTU1	214 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	LINC00596	Q86U02	117 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	KIR3DL3	Q8N743	410 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	TPRX1	Q8N7U7	411 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	LY6G5B	Q8NDX9	201 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	PPP1R35	Q8TAP8	253 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	CENPO	Q9BU64	300 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	ZNF747	Q9BV97	191 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	RNF167	Q9H6Y7	350 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	ING3	Q9NXR8	418 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	GHRL	Q9UBU3	117 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	STEAP1	Q9UHE8	339 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678		V9GY05	133 aa		6.59	□□□□□ -1.35
PUM1-223	ENST00000532678	TRAV24	A0A0B4J272	114 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	MEX3A	A1L020	520 aa	Known RBP	6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	AIRE	O43918	545 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	TOX4	O94842	621 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	CSN2	P05814	226 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	MMP9	P14780	707 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	ARSB	P15848	533 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	CCL3L1	P16619	93 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	TGFBR1	P36897	503 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	P2RX3	P56373	397 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	ARF6	P62330	175 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	FOXL1	Q12952	345 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	UNC119	Q13432	240 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	MPV17L	Q2QL34	196 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	TIMM50	Q3ZCQ8	353 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	PRR31	Q5SQ13	230 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	ATAD3C	Q5T2N8	411 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	LCE3B	Q5TA77	95 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	STEAP3	Q658P3	488 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	TMEM200B	Q69YZ2	307 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	OR10K2	Q6IF99	312 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	VMO1	Q7Z5L0	202 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	NR2C2AP	Q86WQ0	139 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	CMTM4	Q8IZR5	234 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	SUMF2	Q8NBJ7	301 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	OR51D1	Q8NGF3	324 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	OR5D13	Q8NGL4	314 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	OR13F1	Q8NGS4	319 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	SLC25A28	Q96A46	364 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	UPRT	Q96BW1	309 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	MRPS24	Q96EL2	167 aa	Known RBP	6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	COQ2	Q96H96	371 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	KCTD7	Q96MP8	289 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	WDFY2	Q96P53	400 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	TBX15	Q96SF7	602 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	NICN1	Q9BSH3	213 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	DPCD	Q9BVM2	203 aa	Predicted RBP	6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	TMEM59	Q9BXS4	323 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	SELENOI	Q9C0D9	397 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	SIRPD	Q9H106	197 aa		6.58	□□□□□ -1.36
PUM1-223	ENST00000532678	IFT22	Q9H7X7	185 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms