RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CSNK2A3	Q8NEV1	391 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	C2CD4C	Q8TF44	421 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	HIST1H2BA	Q96A08	127 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	TM2D1	Q9BX74	207 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	BANF2	Q9H503	90 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	CDH20	Q9HBT6	801 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	PRR13	Q9NZ81	148 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	PLA2G2E	Q9NZK7	142 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	C14orf166	Q9Y224	244 aa	Known RBP	12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	SMG1	Q96Q15	3661 aa	Known RBP	12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540		C9JQL5	133 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	CRTAP	O75718	401 aa	Predicted RBP	12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	IFNA2	P01563	188 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	HCK	P08631	526 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	PI3	P19957	117 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	TUBG1	P23258	451 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	GLRA1	P23415	457 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	RPL12	P30050	165 aa	Known RBP	12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	SNU13	P55769	128 aa	Known RBP	12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	HGFAC	Q04756	655 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	TFF3	Q07654	80 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	TMEM108	Q6UXF1	575 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540		Q6ZRG5	221 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZFP82	Q8N141	532 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	POM121L2	Q96KW2	1035 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	GPR84	Q9NQS5	396 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	TUBG2	Q9NRH3	451 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	EHF	Q9NZC4	300 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZMAT5	Q9UDW3	170 aa	Known RBP	12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	STARD10	Q9Y365	291 aa		12.46	□□□□□ -0.41
NR1H3-231	ENST00000529540	CFAP46	Q8IYW2	2715 aa		12.46	□□□□□ -0.42
NR1H3-231	ENST00000529540	NBAS	A2RRP1	2371 aa		12.46	□□□□□ -0.42
NR1H3-231	ENST00000529540		A0A1W2PR80	420 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	C5orf49	A4QMS7	147 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	SERPINE3	A8MV23	424 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540		J3QKU1	62 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	DEDD	O75618	318 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	IGLV3-1	P01715	115 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	MT-ND4L	P03901	98 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	CTSD	P07339	412 aa	Predicted RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	NAT2	P11245	290 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	CD80	P33681	288 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	THBS4	P35443	961 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	RBMX	P38159	391 aa	Known RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	ZNF121	P58317	390 aa	Predicted RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	SMCO1	Q147U7	214 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	ZNF561	Q8N587	486 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	UBAC2	Q8NBM4	344 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	CCDC54	Q8NEL0	328 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	OR5L1	Q8NGL2	311 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	OR14K1	Q8NGZ2	314 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	C14orf79	Q96F83	325 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	SPACA5	Q96QH8	159 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	ZNF251	Q9BRH9	671 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	TCEAL7	Q9BRU2	100 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	PECR	Q9BY49	303 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	RGCC	Q9H4X1	137 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	OPA3	Q9H6K4	179 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	PLEKHA2	Q9HB19	425 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	SEBOX	Q9HB31	216 aa	Predicted RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	FBXL17	Q9UF56	701 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540		K7EPK0	472 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	CRYAA	P02489	173 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	HOXB5	P09067	269 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	CCNO	P22674	350 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	FCGR2C	P31995	323 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	IAH1	Q2TAA2	248 aa	Predicted RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	FAM71E2	Q8N5Q1	922 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	PNLDC1	Q8NA58	520 aa	Known RBP	12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	C1QTNF5	Q9BXJ0	243 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	DECR2	Q9NUI1	292 aa		12.45	□□□□□ -0.42
NR1H3-231	ENST00000529540	IGKV1-9	A0A0C4DH69	117 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540		A0A0U1RQV5	110 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540		A0A1W2PP11	408 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	XRCC2	O43543	280 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	HTR3B	O95264	441 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	SFTPB	P07988	381 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	CECR9	P0C854	216 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	PLA2G2A	P14555	144 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	SNRPE	P62304	92 aa	Known RBP	12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	MALL	Q13021	153 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540		Q6ZSR3	168 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	OR51T1	Q8NGJ9	327 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	MALSU1	Q96EH3	234 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	PGAM5	Q96HS1	289 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	WFIKKN1	Q96NZ8	548 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	CLCC1	Q96S66	551 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	GPER1	Q99527	375 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	SOX7	Q9BT81	388 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	ST6GALNAC5	Q9BVH7	336 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	BCL2L14	Q9BZR8	327 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	GSKIP	Q9P0R6	139 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	METTL1	Q9UBP6	276 aa	Known RBP	12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	EDAR	Q9UNE0	448 aa		12.44	□□□□□ -0.42
NR1H3-231	ENST00000529540	IGHV1-18	A0A0C4DH31	117 aa		12.43	□□□□□ -0.42
NR1H3-231	ENST00000529540	CRYM-AS1	A6NIL9	109 aa		12.43	□□□□□ -0.42
NR1H3-231	ENST00000529540		M0R1B8	84 aa		12.43	□□□□□ -0.42
NR1H3-231	ENST00000529540	IFNA21	P01568	189 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms