RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	SHISA3	A0PJX4	238 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	IFITM5	A6NNB3	132 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TRIM77	I1YAP6	450 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	VENTX	O95231	258 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	MT-ND4	P03905	459 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RAB12	Q6IQ22	244 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	HCP5	Q6MZN7	132 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	HEPN1	Q6WQI6	88 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	BRD3OS	Q6XYD6	125 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851		Q6YL49	198 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SLC16A12	Q6ZSM3	486 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TRAPPC6B	Q86SZ2	158 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RTN4RL2	Q86UN3	420 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	GAPT	Q8N292	157 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	OR11H6	Q8NGC7	330 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	OR51D1	Q8NGF3	324 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PLPPR1	Q8TBJ4	325 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	C22orf15	Q8WYQ4	148 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PTX4	Q96A99	478 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	FAM3D	Q96BQ1	224 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	YIPF6	Q96EC8	236 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	NEDD4L	Q96PU5	975 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SLC6A7	Q99884	636 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TMEM59	Q9BXS4	323 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	MEGF9	Q9H1U4	602 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ZMAT3	Q9HA38	289 aa	Known RBP	6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RAB9B	Q9NP90	201 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RAB22A	Q9UL26	194 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SESN1	Q9Y6P5	492 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ABCA2	Q9BZC7	2435 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	MTOR	P42345	2549 aa		6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ANK3	Q12955	4377 aa	Known RBP	6.33	□□□□□ -1.4
MS4A6A-208	ENST00000528851	KBTBD11-OT1	A0A1B0GTJ5	212 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TMEM30CP	A0ZSE6	113 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	NOTO	A8MTQ0	251 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	CLDN34	H7C241	214 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	NPFF	O15130	113 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	LDLRAD4	O15165	306 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ORC5	O43913	435 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PDCD6	O75340	191 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	LGALS4	P56470	323 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	BAMBI	Q13145	260 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	UNC119	Q13432	240 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ATXN7L3	Q14CW9	347 aa	Predicted RBP	6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	C17orf58	Q2M2W7	97 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	DEFB112	Q30KQ8	113 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SIGIRR	Q6IA17	410 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ZNF497	Q6ZNH5	498 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TCF23	Q7RTU1	214 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TMEM86B	Q8N661	226 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SIGLECL1	Q8N7X8	197 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ZNF48	Q96MX3	618 aa	Predicted RBP	6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	CHCHD6	Q9BRQ6	235 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	LPAR5	Q9H1C0	372 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	KIF25	Q9UIL4	384 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	HSF4	Q9ULV5	492 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	FAM96B	Q9Y3D0	163 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851		A0A087X0M5	115 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851		A0A1B0GX30	115 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	NPIPB11	E5RHQ5	1161 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	AIP	O00170	330 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	HSPB6	O14558	160 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	FBP1	P09467	338 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RAB6A	P20340	208 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	GADD45A	P24522	165 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	CD34	P28906	385 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	BLVRB	P30043	206 aa	Predicted RBP	6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	P2RY14	Q15391	338 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	AANAT	Q16613	207 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	HES5	Q5TA89	166 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RUSC1-AS1	Q66K80	236 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	OR10K2	Q6IF99	312 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TRAT1	Q6PIZ9	186 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ZNF554	Q86TJ5	538 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	LDLRAD3	Q86YD5	345 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PDZD9	Q8IXQ8	264 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PNKD	Q8N490	385 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ZDHHC22	Q8N966	263 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	OR56B1	Q8NGI3	324 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	NEK7	Q8TDX7	302 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	FAM46B	Q96A09	425 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	MALSU1	Q96EH3	234 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TMEM133	Q9H2Q1	129 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	RIMS4	Q9H426	269 aa	Predicted RBP	6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PLEKHJ1	Q9NW61	149 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ING3	Q9NXR8	418 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ETAA1	Q9NY74	926 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	TBL2	Q9Y4P3	447 aa	Known RBP	6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	POMT1	Q9Y6A1	747 aa		6.32	□□□□□ -1.4
MS4A6A-208	ENST00000528851	DOCK11	Q5JSL3	2073 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	ZAN	Q9Y493	2812 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851		A0A0U1RQK1	487 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	METTL21EP	A6NDL7	271 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	AIRE	O43918	545 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	CLPX	O76031	633 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	CDK2	P24941	298 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	CHAT	P28329	748 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SDC2	P34741	201 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	PRRX1	P54821	245 aa		6.31	□□□□□ -1.4
MS4A6A-208	ENST00000528851	SCAND1	P57086	179 aa		6.31	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms