RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 KCNJ3P48549 501 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 RORCP51449 518 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 EDDM3BP56851 147 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 EDDM3AQ14507 147 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 ZNF260Q3ZCT1 412 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 KRBOX4Q5JUW0 171 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 IL17RELQ6ZVW7 336 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 CROCCP3Q8IVE0 287 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 FAM185AQ8N0U4 392 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 OR4M2Q8NGB6 313 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 MRPL30Q8TCC3 161 aaKnown RBP8.82□□□□□ -1
NEDD8-205ENST00000527046 AJUBAQ96IF1 538 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 WDFY2Q96P53 400 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 HDHD3Q9BSH5 251 aaPredicted RBP8.82□□□□□ -1
NEDD8-205ENST00000527046 URM1Q9BTM9 101 aaKnown RBP8.82□□□□□ -1
NEDD8-205ENST00000527046 NXF2Q9GZY0 626 aaKnown RBP8.82□□□□□ -1
NEDD8-205ENST00000527046 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD8-205ENST00000527046 RHBDL2Q9NX52 303 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 ING3Q9NXR8 418 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 ETV7Q9Y603 341 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 AUP1Q9Y679 476 aa8.82□□□□□ -1
NEDD8-205ENST00000527046 TEP1Q99973 2627 aaKnown RBP8.82□□□□□ -1
NEDD8-205ENST00000527046 SONP18583 2426 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 CENPVL3A0A0U1RRI6 287 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 MCRIP1C9JLW8 97 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 RNASEK-C17orf49H0YIS7 233 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 ZNF701M0R085 212 aaPredicted RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 CTDSP2O14595 271 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 EIF4EP06730 217 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 ZNF728P0DKX0 622 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 IGHV4-38-2P0DP08 117 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 GNB3P16520 340 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 PRTN3P24158 256 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 DYNC1I2Q13409 638 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 NKAPLQ5M9Q1 402 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 LDLRAD2Q5SZI1 272 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 Q6ZTK2 550 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 KIR3DL3Q8N743 410 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 DTX3Q8N9I9 347 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 OR56B1Q8NGI3 324 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 PPP1R35Q8TAP8 253 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 CCDC107Q8WV48 283 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 KCTD12Q96CX2 325 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 DGCR14Q96DF8 476 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 ATG5Q9H1Y0 275 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 SPACA1Q9HBV2 294 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 MBNL3Q9NUK0 354 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 RSL24D1Q9UHA3 163 aaKnown RBP8.81□□□□□ -1
NEDD8-205ENST00000527046 AK3Q9UIJ7 227 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 KCNS2Q9ULS6 477 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 KPTNQ9Y664 436 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 LINC00312Q9Y6C7 94 aa8.81□□□□□ -1
NEDD8-205ENST00000527046 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 SMIM31A0A1B0GVY4 71 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 hADV38S2A0JD32 116 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 M0R1W7 72 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 SSX5O60225 188 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 HPGDSO60760 199 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 TOX4O94842 621 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 HLA-DQB1P01920 261 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 MELTFP08582 738 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 PTHLHP12272 177 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 RCC1P18754 421 aaPredicted RBP8.8□□□□□ -1
NEDD8-205ENST00000527046 ELK1P19419 428 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 RBM39Q14498 530 aaKnown RBP8.8□□□□□ -1
NEDD8-205ENST00000527046 BTNL3Q6UXE8 466 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 VMO1Q7Z5L0 202 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 OR4K15Q8NH41 348 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 CMTM3Q96MX0 182 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 NEDD4LQ96PU5 975 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 PLEKHJ1Q9NW61 149 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 ETAA1Q9NY74 926 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 TAS2R3Q9NYW6 316 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 COMMD3Q9UBI1 195 aa8.8□□□□□ -1
NEDD8-205ENST00000527046 UBE2J1Q9Y385 318 aaPredicted RBP8.8□□□□□ -1
NEDD8-205ENST00000527046 A0A075B6Q4 140 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 IGKV1D-8A0A087WSZ0 117 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 MEIKINA0A087WXM9 373 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 KBTBD11-OT1A0A1B0GTJ5 212 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 TMEM30CPA0ZSE6 113 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 C12orf77C9JDV5 145 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 CRLF1O75462 422 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 IGHV1-8P0DP01 117 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 HIST1H1DP16402 221 aaKnown RBP8.79□□□□□ -1
NEDD8-205ENST00000527046 OMGP23515 440 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 CDK2P24941 298 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 RANBP1P43487 201 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 LOXL3P58215 753 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 KLRD1Q13241 179 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 CDNFQ49AH0 187 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 HEPN1Q6WQI6 88 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 IZUMO1Q8IYV9 350 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 BCL6BQ8N143 479 aaPredicted RBP8.79□□□□□ -1
NEDD8-205ENST00000527046 PNKDQ8N490 385 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 SAMD12Q8N8I0 201 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 MRGPRDQ8TDS7 321 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 ACOT12Q8WYK0 555 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 RAB3CQ96E17 227 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 PCGF1Q9BSM1 259 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms