RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 LEPROTL1O95214 131 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 FMODQ06828 376 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
LRRK1-202ENST00000525284 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 SLC17A5Q9NRA2 495 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 CBLN4Q9NTU7 201 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 MYH1P12882 1939 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 C1QTNF9BB2RNN3 333 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 CLDN10P78369 228 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF774Q6NX45 483 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 MRPL16Q9NX20 251 aaKnown RBP12.1□□□□□ -0.47
LRRK1-202ENST00000525284 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 CD27P26842 260 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 MVDP53602 400 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
LRRK1-202ENST00000525284 PLPPR5Q32ZL2 321 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 TMEM207Q6UWW9 146 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 STXBP6Q8NFX7 210 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 A0A1B0GWB2 263 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 TCRBV5S2A0A599 114 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 PRSS12P56730 875 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 WIPI1Q5MNZ9 446 aaPredicted RBP12.1□□□□□ -0.47
LRRK1-202ENST00000525284 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
LRRK1-202ENST00000525284 FOXJ2Q9P0K8 574 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 NUP98P52948 1817 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 PMCHL1Q16048 86 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 TMEM52BQ4KMG9 183 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 OR10D3Q8NH80 312 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 TMEM101Q96IK0 257 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 P2RX4Q99571 388 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 FGF22Q9HCT0 170 aa12.1□□□□□ -0.47
LRRK1-202ENST00000525284 PDCD6O75340 191 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF273Q14593 569 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 RTL10Q7L3V2 364 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 HYAL3O43820 417 aaPredicted RBP12.09□□□□□ -0.47
LRRK1-202ENST00000525284 DLX6P56179 175 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
LRRK1-202ENST00000525284 YBX1P67809 324 aaKnown RBP12.09□□□□□ -0.47
LRRK1-202ENST00000525284 CTF1Q16619 201 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 WDR13Q9H1Z4 485 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 LOXL2Q9Y4K0 774 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 C9orf172C9J069 976 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 TRGC2P03986 189 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 ZGLP1P0C6A0 271 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 HOXA6P31267 233 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 A0A1B0GTH9 108 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF205O95201 554 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 ST6GAL1P15907 406 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 SKP2Q13309 424 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 STPG2Q8N412 459 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 ST6GAL2Q96JF0 529 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 DDTP30046 118 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
LRRK1-202ENST00000525284 MEF2CQ06413 473 aaPredicted RBP12.09□□□□□ -0.47
LRRK1-202ENST00000525284 FAHD1Q6P587 224 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 SIRT5Q9NXA8 310 aa12.09□□□□□ -0.47
LRRK1-202ENST00000525284 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 KRTCAP3Q53RY4 240 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 PAXXQ9BUH6 204 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 DDA1Q9BW61 102 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 PARLQ9H300 379 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 C6orf106Q9H6K1 298 aaPredicted RBP12.08□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF665Q9H7R5 613 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.47
LRRK1-202ENST00000525284 HIGD1AQ9Y241 93 aa12.08□□□□□ -0.47
LRRK1-202ENST00000525284 RIMKLAQ8IXN7 391 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 PGLYRP4Q96LB8 373 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 PLA2G3Q9NZ20 509 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 ZBTB42B2RXF5 422 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 FIZ1Q96SL8 496 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 NEU1Q99519 415 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 TRGV5A0A0B4J1U4 118 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 ARRDC5A6NEK1 342 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 NDUFS8O00217 210 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 LOXL3P58215 753 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 MORN1Q5T089 497 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 EBLN2Q6P2I7 272 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 KLHDC9Q8NEP7 349 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 SLC26A1Q9H2B4 701 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 SAP30LQ9HAJ7 183 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 A0A0B4J293 547 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 SLC23A3Q6PIS1 610 aa12.08□□□□□ -0.48
LRRK1-202ENST00000525284 SS18L1O75177 396 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-202ENST00000525284 CA1P00915 261 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-202ENST00000525284 NAAAQ02083 359 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms