RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 USH1CQ9Y6N9 552 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 NINQ8N4C6 2090 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRAV8-4A0A0B4J246 113 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRAV8-6A0A0B4J262 113 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 RAB19A4D1S5 217 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMEM150BA6NC51 233 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 GOLGA8IPA6NC78 632 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 LRCOL1A6NCL2 159 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 GOLGA8JA6NMD2 632 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 RNASEK-C17orf49H0YIS7 233 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC16A4O15374 487 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 NDUFS6O75380 124 aaKnown RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 BANF1O75531 89 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 ATP5HO75947 161 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 P01737 135 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 HLA-DRAP01903 254 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 PRB2P02812 416 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 GP1BAP07359 652 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 MMP7P09237 267 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 MUC1P15941 1255 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 ME2P23368 584 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 RPA3P35244 121 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 RGS6P49758 472 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 IFITM3Q01628 133 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF816Q0VGE8 651 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 EIF4EBP1Q13541 118 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRIP13Q15645 432 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TTC32Q5I0X7 151 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 FAM222AQ5U5X8 452 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 FKBP1CQ5VVH2 108 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 CLEC6AQ6EIG7 209 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 PPP1R2P3Q6NXS1 205 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 GUSBP11Q6P575 273 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF101Q8IZC7 436 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 OSR2Q8N2R0 312 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRIML2Q8N7C3 387 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TTLQ8NG68 377 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 ENKURQ8TC29 256 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 CPNE4Q96A23 557 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 RERGQ96A58 199 aaPredicted RBP1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC25A46Q96AG3 418 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF382Q96SR6 550 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 CTRCQ99895 268 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 TIMM29Q9BSF4 260 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 RSG1Q9BU20 258 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 SHCBP1LQ9BZQ2 653 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 VCXQ9H320 206 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 SAR1AQ9NR31 198 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC7A11Q9UPY5 501 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 AP3M1Q9Y2T2 418 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 HES2Q9Y543 173 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 LRRC42Q9Y546 428 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 PLXNA2O75051 1894 aa1.99□□□□□ -2.09
HMGN1P28-201ENST00000521340 PLXND1Q9Y4D7 1925 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 GOLGA8QA0A0J9YX86 632 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 KIR2DS1A0A191URI9 304 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 A0A1B0GXF2 115 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 hCG_2039718K7EN88 272 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 PLPP3O14495 311 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 CDIPTO14735 213 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 CHST10O43529 356 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 NDUFS5O43920 106 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 SCN2BO60939 215 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 FOXH1O75593 365 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 MPZL1O95297 269 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 WISP3O95389 354 aaPredicted RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 PSMG1O95456 288 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 ASS1P00966 412 aaKnown RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 RPN2P04844 631 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 CALB1P05937 261 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 RPSAP08865 295 aaKnown RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR56A5P0C7T3 313 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 NELFEP18615 380 aaKnown RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 IL12BP29460 328 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 ALDH3A1P30838 453 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 PHBP35232 272 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 MAGEA3P43357 314 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 MAGEA6P43360 314 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 DNASE1L1P49184 302 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 RAP1GDS1P52306 607 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 LINC00315P59091 139 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 NAB1Q13506 487 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 C5orf47Q569G3 176 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 ACSBG2Q5FVE4 666 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 HHATQ5VTY9 493 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF470Q6ECI4 717 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 SPOPLQ6IQ16 392 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 MORN3Q6PF18 240 aaPredicted RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 PRNTQ86SH4 94 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 MDP1Q86V88 176 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 C4orf33Q8N1A6 199 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMEM256Q8N2U0 113 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 TCAIMQ8N3R3 496 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR5T1Q8NG75 326 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR4K2Q8NGD2 314 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR2L8Q8NGY9 312 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 ACTL9Q8TC94 416 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMEM239Q8WW34 195 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 DNAJC9Q8WXX5 260 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms