RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SPNP16150 400 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 ZNF3P17036 446 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 CSRP1P21291 193 aaKnown RBP1.28□□□□□ -2.2
SKP1-207ENST00000520417 CRABP1P29762 137 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 PLTPP55058 493 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 XIAPP98170 497 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 PRDX1Q06830 199 aaKnown RBP1.28□□□□□ -2.2
SKP1-207ENST00000520417 ZCWPW2Q504Y3 356 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 NIPAL1Q6NVV3 410 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 DGAT2L6Q6ZPD8 337 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 OR2AE1Q8NHA4 323 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 SPPL2BQ8TCT7 592 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 PDCD6IPQ8WUM4 868 aaKnown RBP1.28□□□□□ -2.2
SKP1-207ENST00000520417 CLDN23Q96B33 292 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 LRRC39Q96DD0 335 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 CMBLQ96DG6 245 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 TUBA4BQ9H853 241 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 SLC23A2Q9UGH3 650 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 URGCP-MRPS24S4R325 110 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 TRAV8-2A0A0B4J237 113 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 A0A1B0GW15 77 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 F5H5T6 163 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 RNASEK-C17orf49H0YIS7 233 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 CA2P00918 260 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 PRB1P04280 392 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 S100A9P06702 114 aaKnown RBP1.27□□□□□ -2.21
SKP1-207ENST00000520417 TPM1P09493 284 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 EVI2BP34910 448 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 HSPA13P48723 471 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 RHOAP61586 193 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 BAXQ07812 192 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 LAMTOR1Q6IAA8 161 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 NIT1Q86X76 327 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 RBM45Q8IUH3 476 aaKnown RBP1.27□□□□□ -2.21
SKP1-207ENST00000520417 ST13P4Q8IZP2 240 aaPredicted RBP1.27□□□□□ -2.21
SKP1-207ENST00000520417 OR11G2Q8NGC1 345 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 OR5C1Q8NGR4 320 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 OR2V1Q8NHB1 315 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 TAPBPLQ9BX59 468 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 RAB1BQ9H0U4 201 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 FBXL15Q9H469 300 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 GOLPH3Q9H4A6 298 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 HAUS4Q9H6D7 363 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 IFT46Q9NQC8 304 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 TAS2R9Q9NYW1 312 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 CLEC2DQ9UHP7 191 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 RPUSD1Q9UJJ7 312 aaKnown RBP1.27□□□□□ -2.21
SKP1-207ENST00000520417 PHLDA3Q9Y5J5 127 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 USH1CQ9Y6N9 552 aa1.27□□□□□ -2.21
SKP1-207ENST00000520417 FAM183AA6NL82 134 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 PSMD11O00231 422 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 TOR1AO14656 332 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 AKR1C4P17516 323 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 TSPOP30536 169 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 GTF2H1P32780 548 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 PSG4Q00888 419 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 TSPAN31Q12999 210 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 MMDQ15546 238 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 C10orf91Q5T1B1 145 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 SLC25A45Q8N413 288 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 KRTCAP2Q8N6L1 136 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 ZIC4Q8N9L1 334 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 KCTD4Q8WVF5 259 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.26□□□□□ -2.21
SKP1-207ENST00000520417 ZNF75CPQ92670 426 aaPredicted RBP1.26□□□□□ -2.21
SKP1-207ENST00000520417 MSANTD3Q96H12 275 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 PGLYRP3Q96LB9 341 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 SIKE1Q9BRV8 207 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 FAAP24Q9BTP7 215 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 POTEKPQ9BYX7 375 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 TAS2R13Q9NYV9 303 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 VPREB3Q9UKI3 123 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 ZNF337Q9Y3M9 751 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 MIA3Q5JRA6 1907 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 PLXNB3Q9ULL4 1909 aa1.26□□□□□ -2.21
SKP1-207ENST00000520417 BRD4O60885 1362 aaPredicted RBP1.25□□□□□ -2.21
SKP1-207ENST00000520417 TRGV4A0A0C4DH28 118 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 LECT2O14960 151 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 FABP7O15540 132 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 SLC25A20O43772 301 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 SHOX2O60902 331 aaPredicted RBP1.25□□□□□ -2.21
SKP1-207ENST00000520417 MAGEA3P43357 314 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 MP68P56378 58 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 RAB2AP61019 212 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 APOFQ13790 326 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 C18orf21Q32NC0 220 aaPredicted RBP1.25□□□□□ -2.21
SKP1-207ENST00000520417 BSXQ3C1V8 233 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 SPIN4Q56A73 249 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 ACSBG2Q5FVE4 666 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 CLEC20AQ6ZU45 233 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 FAM183BPQ6ZVS7 135 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 AHSA2Q719I0 299 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 SSX7Q7RTT5 188 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 TCF23Q7RTU1 214 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 SCXQ7RTU7 201 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 ZNF567Q8N184 647 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 DTD1Q8TEA8 209 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 XKR8Q9H6D3 395 aa1.25□□□□□ -2.21
SKP1-207ENST00000520417 NXT1Q9UKK6 140 aaKnown RBP1.25□□□□□ -2.21
SKP1-207ENST00000520417 STK38LQ9Y2H1 464 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms