RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TREM2Q9NZC2 230 aa13.06□□□□□ -0.32
THUMPD3-210ENST00000515662 C1QTNF9BB2RNN3 333 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 ATP6V1G2-DDX39BF2Z307 99 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 WNT9BO14905 357 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 BET1O15155 118 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 SLC25A4P12235 298 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 M6PRP20645 277 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 RBMXP38159 391 aaKnown RBP13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 MZT1Q08AG7 82 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 LRRC37A5PQ49AS3 106 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 ABCA11PQ4W5N1 156 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 SHEQ5VZ18 495 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 FIP1L1Q6UN15 594 aaKnown RBP13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 OR2Z1Q8NG97 314 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 TMEM171Q8WVE6 324 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 RSRP1Q9BUV0 290 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 NMES1Q9C002 83 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 UFSP2Q9NUQ7 469 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 CTXN2P0C2S0 81 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 RPA2P15927 270 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 RCC1P18754 421 aaPredicted RBP13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 S100A11P31949 105 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 KLF3P57682 345 aaPredicted RBP13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 C11orf87Q6NUJ2 197 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 ZNF497Q6ZNH5 498 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 ZNF546Q86UE3 836 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 PLPPR1Q8TBJ4 325 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 RTN4IP1Q8WWV3 396 aaPredicted RBP13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 NAA60Q9H7X0 242 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
THUMPD3-210ENST00000515662 HAND1O96004 215 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 CD40P25942 277 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 PHLDA2Q53GA4 152 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 GAPTQ8N292 157 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 MFFQ9GZY8 342 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 METTL8Q9H825 291 aaKnown RBP13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 C1orf123Q9NWV4 160 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 RASL12Q9NYN1 266 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 IGF2RP11717 2491 aa13.04□□□□□ -0.32
THUMPD3-210ENST00000515662 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 MPTX1A8MV57 137 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 DLL1O00548 723 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 SIGLEC5O15389 551 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 TUSC2O75896 110 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 SPDEFO95238 335 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 DIRAS3O95661 229 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 CD200P41217 278 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 HLA-DRB3P79483 266 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 CYCSP99999 105 aaKnown RBP13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 TUSC1Q2TAM9 212 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 ACP7Q6ZNF0 438 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 SYT3Q9BQG1 590 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 OR14J1Q9UGF5 321 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 KIF25Q9UIL4 384 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 RP1L1Q8IWN7 2480 aaPredicted RBP13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 SPTBN4Q9H254 2564 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 IGLV3-9A0A075B6K5 115 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 H7C1Q1 480 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 RP2O75695 350 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 CEBPDP49716 269 aaPredicted RBP13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 PCSK4Q6UW60 755 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 GALNT14Q96FL9 552 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 GLS2Q9UI32 602 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 KCNIP3Q9Y2W7 256 aa13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 HEATR1Q9H583 2144 aaKnown RBP13.03□□□□□ -0.32
THUMPD3-210ENST00000515662 PTBP3O95758 552 aaKnown RBP13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 LMO1P25800 156 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 PSMB6P28072 239 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 RPS23P62266 143 aaKnown RBP13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 MOB1BQ7L9L4 216 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 OR11L1Q8NGX0 322 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 OR10C1Q96KK4 312 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 PCDHB10Q9UN67 800 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 TNFSF18Q9UNG2 199 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 MAP1BP46821 2468 aaKnown RBP13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 ZGRF1Q86YA3 2104 aa13.02□□□□□ -0.32
THUMPD3-210ENST00000515662 HOXB5P09067 269 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 GNRHRP30968 328 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 KCNJ3P48549 501 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 TMEM187Q14656 261 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 ATXN7L3Q14CW9 347 aaPredicted RBP13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 SP6Q3SY56 376 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 STPG2Q8N412 459 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 RND1Q92730 232 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 VKORC1Q9BQB6 163 aa13.02□□□□□ -0.33
THUMPD3-210ENST00000515662 TRBV6-7A0A0A0MS04 114 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 TSPAN4O14817 238 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 PSPNO60542 156 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 RLN2P04090 185 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 OR5AC1P0C628 307 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 BTN1A1Q13410 526 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 CCDC71LQ8N9Z2 235 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 THAP6Q8TBB0 222 aa13.01□□□□□ -0.33
THUMPD3-210ENST00000515662 C2orf50Q96LR7 162 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms