RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PSMA1P25786 263 aaKnown RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 GABARAPL2P60520 117 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 RPS25P62851 125 aaKnown RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 EMX1Q04741 257 aaPredicted RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 ATXN7L3Q14CW9 347 aaPredicted RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 TRAM1Q15629 374 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 SSX1Q16384 188 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 SLC22A6Q4U2R8 563 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 PAN3Q58A45 887 aaKnown RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 OR52W1Q6IF63 320 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 CCBE1Q6UXH8 406 aaPredicted RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 ZNF497Q6ZNH5 498 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 Q6ZSV7 163 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 CEACAM19Q7Z692 300 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 RTN4RL2Q86UN3 420 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 ABHD12Q8N2K0 398 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 OR10A7Q8NGE5 316 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 OR13A1Q8NGR1 328 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 LINC01006Q8NI28 216 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 UFD1Q92890 307 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 FOXRED1Q96CU9 486 aaPredicted RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 KIRREL1Q96J84 757 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 Q96M66 194 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 SSX3Q99909 188 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 TMED9Q9BVK6 235 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 FAM192AQ9GZU8 254 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 GAL3ST2Q9H3Q3 398 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 KIF25Q9UIL4 384 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 MRPS28Q9Y2Q9 187 aaKnown RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 CLPSL1A2RUU4 121 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 TMEM14DPA8MWL7 114 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 C15orf65H3BRN8 121 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 H3BUX3 64 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 OR7C1O76099 320 aaPredicted RBP7.83□□□□□ -1.16
RNF4-221ENST00000513643 PAHP00439 452 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 IL1AP01583 271 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 CSTBP04080 98 aaKnown RBP7.83□□□□□ -1.16
RNF4-221ENST00000513643 ARG1P05089 322 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 VSIG8P0DPA2 414 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 GZMHP20718 246 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 SERPINA2P20848 420 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 PAX6P26367 422 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 GABRA5P31644 462 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 RAG2P55895 527 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 PROK1P58294 105 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 KRTAP10-3P60369 221 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 FABP5Q01469 135 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 LRRC75BQ2VPJ9 315 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 PRAMEF5Q5TYX0 476 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 UBE2UQ5VVX9 321 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 SHISA2Q6UWI4 295 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 SLC16A12Q6ZSM3 486 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 ZNF367Q7RTV3 350 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 SPARTQ8N0X7 666 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 JAGN1Q8N5M9 183 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 C3orf56Q8N813 242 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 ZNF565Q8N9K5 539 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 OR4F5Q8NH21 305 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 ZNF596Q8TC21 504 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 TMEM203Q969S6 136 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 CYYR1Q96J86 154 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 CLEC7AQ9BXN2 247 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 ZNF286AQ9HBT8 521 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 SPACA1Q9HBV2 294 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 TNFRSF19Q9NS68 423 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 BLOC1S6Q9UL45 172 aa7.83□□□□□ -1.16
RNF4-221ENST00000513643 MEIKINA0A087WXM9 373 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 A6NDX4 124 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 FOXI3A8MTJ6 420 aaPredicted RBP7.82□□□□□ -1.16
RNF4-221ENST00000513643 HSPB6O14558 160 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 ORC5O43913 435 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 CA11O75493 328 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 UBBP0CG47 229 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 MGMTP16455 207 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 GALP22466 123 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 OMGP23515 440 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 KIR2DS4P43632 304 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 LGALS4P56470 323 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 LOXL3P58215 753 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 UNC119Q13432 240 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 HLA-DRB5Q30154 266 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 HSD17B12Q53GQ0 312 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 OLFML2AQ68BL7 652 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 GLT8D1Q68CQ7 371 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 LIAT1Q6ZQX7 453 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 Q8N2B8 174 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 FAM89BQ8N5H3 189 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 C8orf31Q8N9H6 132 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 OR52M1Q8NGK5 317 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 WFDC12Q8WWY7 111 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 S100A13Q99584 98 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 CITED1Q99966 193 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 TM2D1Q9BX74 207 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 CCDC90BQ9GZT6 254 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 BANF2Q9H503 90 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 BEX1Q9HBH7 125 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 TCF7L1Q9HCS4 588 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 NDUFB11Q9NX14 153 aa7.82□□□□□ -1.16
RNF4-221ENST00000513643 CALYQ9NYX4 217 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms