RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SIRPB1O00241 398 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 JTBO76095 146 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 SERPINA3P01011 423 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 IGKV1D-33P01593 117 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 IGKV1-33P01594 117 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 IGHG4P01861 327 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 OR8U8P0C7N1 319 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 CGB3P0DN86 165 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 CGB7P0DN87 165 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 OSMP13725 252 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
NEDD9-211ENST00000508546 NFYBP25208 207 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 POLR2IP36954 125 aaKnown RBP7.32□□□□□ -1.24
NEDD9-211ENST00000508546 VEGFCP49767 419 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 RBP2P50120 134 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 ATP1B3P54709 279 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 CXCR4P61073 352 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 CFHR3Q02985 330 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 KCTD21Q4G0X4 260 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 OR11H1Q8NG94 326 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 MYOZ3Q8TDC0 251 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 HAVCR2Q8TDQ0 301 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 RNFT2Q96EX2 444 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 COQ2Q96H96 371 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 CNN2Q99439 309 aaKnown RBP7.32□□□□□ -1.24
NEDD9-211ENST00000508546 TEX12Q9BXU0 123 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 COMMD4Q9H0A8 199 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 LINC00574Q9H8X3 128 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 SLC25A19Q9HC21 320 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 EXOSC4Q9NPD3 245 aaKnown RBP7.32□□□□□ -1.24
NEDD9-211ENST00000508546 OR6C3Q9NZP0 311 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF580Q9UK33 172 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 MYRFQ9Y2G1 1151 aa7.32□□□□□ -1.24
NEDD9-211ENST00000508546 MAGEB4O15481 346 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-211ENST00000508546 SYT7O43581 403 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 MPZL2O60487 215 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 SMIM18P0DKX4 95 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 PSMB8P28062 276 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 EPHA2P29317 976 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 SNU13P55769 128 aaKnown RBP7.31□□□□□ -1.24
NEDD9-211ENST00000508546 RUNX1Q01196 453 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 DIAPH2-AS1Q14236 149 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 KRBOX4Q5JUW0 171 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 PLEKHG7Q6ZR37 379 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 FAM71E2Q8N5Q1 922 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 Q8N6K4 173 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 Q8N9W7 124 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 CHST4Q8NCG5 386 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 PP6455Q8WZ26 134 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 DDB2Q92466 427 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 EAF1Q96JC9 268 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-211ENST00000508546 NCOR1P1Q9H4R4 102 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 MRM2Q9UI43 246 aaKnown RBP7.31□□□□□ -1.24
NEDD9-211ENST00000508546 BLOC1S6Q9UL45 172 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 PSG11Q9UQ72 335 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 GSTK1Q9Y2Q3 226 aa7.31□□□□□ -1.24
NEDD9-211ENST00000508546 NCBP2LA6PVI3 153 aaKnown RBP7.3□□□□□ -1.24
NEDD9-211ENST00000508546 I3L521 148 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 LDLRAD4O15165 306 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 CALCBP10092 127 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 GP9P14770 177 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 POU3F4P49335 361 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 CRISP1P54107 249 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 ISL1P61371 349 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF616Q08AN1 781 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF816Q0VGE8 651 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-211ENST00000508546 PDZK1IP1Q13113 114 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 PTGES3Q15185 160 aaKnown RBP7.3□□□□□ -1.24
NEDD9-211ENST00000508546 ASPHD1Q5U4P2 390 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 TMEM236Q5W0B7 351 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 Q6P435 159 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 SLC16A12Q6ZSM3 486 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 CATSPERDQ86XM0 798 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 SLC35F2Q8IXU6 374 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 IZUMO1Q8IYV9 350 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF565Q8N9K5 539 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 FBLIM1Q8WUP2 373 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 UBE2E2Q96LR5 201 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 MRPS26Q9BYN8 205 aaKnown RBP7.3□□□□□ -1.24
NEDD9-211ENST00000508546 PPIL3Q9H2H8 161 aaKnown RBP7.3□□□□□ -1.24
NEDD9-211ENST00000508546 RHOFQ9HBH0 211 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 ISYNA1Q9NPH2 558 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 IMPAD1Q9NX62 359 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 CHCHD3Q9NX63 227 aaKnown RBP7.3□□□□□ -1.24
NEDD9-211ENST00000508546 IDI2-AS1Q9NZ38 188 aa7.3□□□□□ -1.24
NEDD9-211ENST00000508546 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 IGHV1-3A0A0C4DH29 117 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 IGKV1-9A0A0C4DH69 117 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 IGKV1-12A0A0C4DH73 117 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 ZAR1LA6NP61 321 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 NPIPB11E5RHQ5 1161 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF670-ZNF695F2Z2N8 137 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 H3BSH0 61 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 SLC33A1O00400 549 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-211ENST00000508546 OVOL1O14753 267 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 KDM4BO94953 1096 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 IL1AP01583 271 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 IGKV1D-12P01611 117 aa7.29□□□□□ -1.24
NEDD9-211ENST00000508546 IGF1P05019 195 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms