RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 CPT2P23786 658 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 MPZP25189 248 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 MAS1LP35410 378 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 SRP14P37108 136 aaKnown RBP6.76□□□□□ -1.33
SCN1A-207ENST00000507401 CAV2P51636 162 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 TAS2R60P59551 318 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 UBE2MP61081 183 aaKnown RBP6.76□□□□□ -1.33
SCN1A-207ENST00000507401 PJVKQ0ZLH3 352 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 SCGB2A2Q13296 93 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 RHEBQ15382 184 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 TMEM69Q5SWH9 247 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 ATPAF1Q5TC12 328 aaPredicted RBP6.76□□□□□ -1.33
SCN1A-207ENST00000507401 RAB12Q6IQ22 244 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 LEG1Q6P5S2 330 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 FBXW12Q6X9E4 464 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 COLCA1Q6ZS62 124 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 OR2W3Q7Z3T1 314 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 LNX2Q8N448 690 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 IQCF1Q8N6M8 205 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 SDR9C7Q8NEX9 313 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 OR5M8Q8NGP6 311 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 OR2T27Q8NH04 317 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 OR52I2Q8NH67 350 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 RXFP4Q8TDU9 374 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 PCNPQ8WW12 178 aaKnown RBP6.76□□□□□ -1.33
SCN1A-207ENST00000507401 APOBEC3DQ96AK3 386 aaPredicted RBP6.76□□□□□ -1.33
SCN1A-207ENST00000507401 CMBLQ96DG6 245 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 RAB3CQ96E17 227 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 NMNAT3Q96T66 252 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 PFDN5Q99471 154 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 MSL2Q9HCI7 577 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 CMC2Q9NRP2 79 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 UQCC1Q9NVA1 299 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 IL19Q9UHD0 177 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 KCNG2Q9UJ96 466 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 WIPI2Q9Y4P8 454 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 LHFPL6Q9Y693 200 aa6.76□□□□□ -1.33
SCN1A-207ENST00000507401 PPIAL4EA0A075B759 164 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PPIAL4CA0A0B4J2A2 164 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TEX13DA0A0J9YY54 714 aaPredicted RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 A0A1B0GTI1 187 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 OR5H14A6NHG9 310 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 OR2AT4A6NND4 320 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 RIIAD1A6NNX1 92 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 COLCA2A8K830 154 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PPIAL4DF5H284 164 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TSTD3H0UI37 97 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 J3QLI3 93 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TCF21O43680 179 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 SIX6O95475 246 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PPP1R3DO95685 299 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PNPP00491 289 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 IGHV2-5P01817 119 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 SBK2P0C263 348 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PET100P0DJ07 73 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PPIAL4FP0DN26 164 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 HIST1H1CP16403 213 aaKnown RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 ATF1P18846 271 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 S100A2P29034 98 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TNFAIP6P98066 277 aaPredicted RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 HABP2Q14520 560 aaPredicted RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 MEF2DQ14814 521 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 CDK5R1Q15078 307 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 RSPO1Q2MKA7 263 aaPredicted RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 SFRP4Q6FHJ7 346 aaPredicted RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 SLC18B1Q6NT16 456 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 C11orf87Q6NUJ2 197 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 SSX9Q7RTT3 188 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 MRPL52Q86TS9 123 aaKnown RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 NAA40Q86UY6 237 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 NR2C2APQ86WQ0 139 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 CMTM4Q8IZR5 234 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 ZNF283Q8N7M2 679 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 SLC26A10Q8NG04 563 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 OR8G5Q8NG78 346 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 OR13G1Q8NGZ3 307 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 OR4K13Q8NH42 304 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 RPS4Y2Q8TD47 263 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 RAB24Q969Q5 203 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 PGLYRP3Q96LB9 341 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TSSK2Q96PF2 358 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 ZNF471Q9BX82 626 aaPredicted RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TOLLIPQ9H0E2 274 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 UNKLQ9H9P5 680 aaKnown RBP6.75□□□□□ -1.33
SCN1A-207ENST00000507401 G6PC2Q9NQR9 355 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 TMED3Q9Y3Q3 217 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 DYSFO75923 2080 aa6.75□□□□□ -1.33
SCN1A-207ENST00000507401 FBN3Q75N90 2809 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 TRBV6-7A0A0A0MS04 114 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 C9orf170A2RU37 121 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 SMIM30A4D0T7 59 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 TVP23AA6NH52 213 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 GPR31O00270 319 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 BHLHE40O14503 412 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 GOSR2O14653 212 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 SLC31A2O15432 143 aa6.74□□□□□ -1.33
SCN1A-207ENST00000507401 SCGNO76038 276 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms