RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 DEFB119Q8N690 84 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 DRAXINQ8NBI3 349 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 OLFM3Q96PB7 478 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 PITX2Q99697 317 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 BCL7BQ9BQE9 202 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF251Q9BRH9 671 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 CHID1Q9BWS9 393 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 MAP1LC3CQ9BXW4 147 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 BEX2Q9BXY8 128 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ULBP1Q9BZM6 244 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 BCL2L14Q9BZR8 327 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 CHD2O14647 1828 aaKnown RBP0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 COL6A6A6NMZ7 2263 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 TRAV8-3A0A0A6YYJ7 113 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 IGKV1D-43A0A0B4J1Z2 117 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 A0A1B0GXF2 115 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 GOLGA8IPA6NC78 632 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 RBFOX3A6NFN3 312 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR5H14A6NHG9 310 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 I3L4J1 428 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 M0QXV9 152 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 LECT2O14960 151 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 SH2D1AO60880 128 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZMPSTE24O75844 475 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 MYO1DO94832 1006 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 VAPBO95292 243 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 GYPCP04921 128 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCDC172P0C7W6 258 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR12D1P0DN82 309 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 GZMBP10144 247 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 PSKH1P11801 424 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCNOP22674 350 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 RPA3P35244 121 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 NUP62P37198 522 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 MAGEA3P43357 314 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 TSPAN5P62079 268 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 VSNL1P62760 191 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 C2orf80Q0P641 193 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 GUSBP1Q15486 140 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 C6orf183Q5T699 404 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 NXNL2Q5VZ03 156 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 HBMQ6B0K9 141 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 LAIR2Q6ISS4 152 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAHD1Q6P587 224 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 NIT1Q86X76 327 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 RBM45Q8IUH3 476 aaKnown RBP0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 C10orf107Q8IVU9 208 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 SYS1Q8N2H4 156 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 FER1L6-AS1Q8NA97 138 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 ACBD4Q8NC06 268 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR8G5Q8NG78 346 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR4K17Q8NGC6 315 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR52K1Q8NGK4 314 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR4A15Q8NGL6 344 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 CLHC1Q8NHS4 586 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 LGALS14Q8TCE9 139 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 DTD1Q8TEA8 209 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCL17Q92583 94 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 ADTRPQ96IZ2 230 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 DNAJC30Q96LL9 226 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 GLT1D1Q96MS3 346 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLC25A31Q9H0C2 315 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 MFSD1Q9H3U5 465 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 METTL8Q9H825 291 aaKnown RBP0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR51B4Q9Y5P0 310 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 URGCP-MRPS24S4R325 110 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 NCKAP5O14513 1909 aa0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 POLR3AO14802 1390 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P29-201ENST00000505659 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLX4Q8IY92 1834 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 IGHV1-45A0A0A0MS14 117 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 IGHV2-26A0A0B4J1V2 119 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 A0A1W2PQL4 384 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 A0A1W2PRG6 482 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 RAB19A4D1S5 217 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 FNDC10F2Z333 226 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 K7EN84 100 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 hCG_2039718K7EN88 272 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 CRXO43186 299 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 TCF21O43680 179 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 ENSAO43768 121 aaKnown RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 CSTAP01040 98 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 PYCR1P32322 319 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 GTF2H1P32780 548 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 GABRA4P48169 554 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 GCLMP48507 274 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 HBG1P69891 147 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 HBG2P69892 147 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 MMDQ15546 238 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 TRIP13Q15645 432 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 SPIN4Q56A73 249 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 ACSBG2Q5FVE4 666 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 ACTL10Q5JWF8 245 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 LAMTOR1Q6IAA8 161 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 OLIG3Q7RTU3 272 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAM19A1Q7Z5A9 133 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 ST13P4Q8IZP2 240 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 SPICQ8N5J4 248 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZNF563Q8TA94 476 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 LRRC20Q8TCA0 184 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms