RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 UBCP0CG48 685 aaKnown RBP12.61□□□□□ -0.39
MUC1-220ENST00000498431 PRKACBP22694 351 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 ECI1P42126 302 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 GLP1RP43220 463 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 ISL1P61371 349 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 SLC35B1P78383 322 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 TP53I3Q53FA7 332 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 SLC25A30Q5SVS4 291 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 UTS2BQ765I0 119 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 COMMD1Q8N668 190 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 OR10H4Q8NGA5 316 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 OR13A1Q8NGR1 328 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 RHOXF1Q8NHV9 184 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 OPALINQ96PE5 141 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 PCDHB16Q9NRJ7 776 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
MUC1-220ENST00000498431 SCOCQ9UIL1 159 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 PSG11Q9UQ72 335 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
MUC1-220ENST00000498431 HSPB6O14558 160 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 GNG10P50151 68 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 LTC4SQ16873 150 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 MEDAGQ5VYS4 303 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 C8orf59Q8N0T1 100 aaPredicted RBP12.6□□□□□ -0.39
MUC1-220ENST00000498431 OR10AC1Q8NH08 325 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 CALYQ9NYX4 217 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 OR6C3Q9NZP0 311 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
MUC1-220ENST00000498431 CSMD3Q7Z407 3707 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 STARD9Q9P2P6 4700 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 A0A1W2PPE3 182 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 SEC14L6B5MCN3 397 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 ZNF20P17024 532 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 GABRB1P18505 474 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 HTR1FP30939 366 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 GP2P55259 537 aaKnown RBP12.59□□□□□ -0.39
MUC1-220ENST00000498431 NANOS3P60323 173 aaKnown RBP12.59□□□□□ -0.39
MUC1-220ENST00000498431 ZNF85Q03923 595 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 C9orf66Q5T8R8 295 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 TEX38Q6PEX7 206 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 FOXRED2Q8IWF2 684 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 CHST4Q8NCG5 386 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 OR51A4Q8NGJ6 313 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 OR51T1Q8NGJ9 327 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 OR2G2Q8NGZ5 317 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 RFESDQ8TAC1 157 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 RFKQ969G6 155 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 SPSB1Q96BD6 273 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 Q96MT0 163 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 ZNF184Q99676 751 aaPredicted RBP12.59□□□□□ -0.39
MUC1-220ENST00000498431 IDI2-AS1Q9NZ38 188 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 FRRS1LQ9P0K9 344 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 KIF25Q9UIL4 384 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 RAB26Q9ULW5 256 aa12.59□□□□□ -0.39
MUC1-220ENST00000498431 IGHV3-72A0A0B4J1Y9 119 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 SNTNA6NMZ2 147 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 DEGS1O15121 323 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 GNAO1P09471 354 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 GPR12P47775 334 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 RAB7AP51149 207 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 TMED1Q13445 227 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 OR8U1Q8NH10 309 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 RBMXL1Q96E39 390 aaKnown RBP12.58□□□□□ -0.4
MUC1-220ENST00000498431 Q9H521 79 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 NEK6Q9HC98 313 aa12.58□□□□□ -0.4
MUC1-220ENST00000498431 MEIKINA0A087WXM9 373 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 TRAV39A0A0B4J263 110 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 AP4M1O00189 453 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 IL1AP01583 271 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 REG1BP48304 166 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 GPR50Q13585 617 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 EBI3Q14213 229 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 PNLIPRP3Q17RR3 467 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 KLHL22Q53GT1 634 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 SAXO1Q8IYX7 474 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 MRGPRDQ8TDS7 321 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
MUC1-220ENST00000498431 ANKRD60Q9BZ19 345 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 LINC00574Q9H8X3 128 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 AASSQ9UDR5 926 aa12.57□□□□□ -0.4
MUC1-220ENST00000498431 TRAV24A0A0B4J272 114 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
MUC1-220ENST00000498431 NPIPB11E5RHQ5 1161 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 HSD17B6O14756 317 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 MT-ND2P03891 347 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 ISG15P05161 165 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 OCM2P0CE71 109 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 OCMP0CE72 109 aaPredicted RBP12.56□□□□□ -0.4
MUC1-220ENST00000498431 CHATP28329 748 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 SSTR5P35346 364 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 CDX1P47902 265 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms