RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 E2F6O75461 281 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CDRT1O95170 752 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 LYPLA2O95372 231 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 IGHG3P01860 377 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TRGV3P03979 118 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR13C7P0DN81 318 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CGB3P0DN86 165 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 HSPA5P11021 654 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 HLA-DOBP13765 273 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 COX6B1P14854 86 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 NPPBP16860 134 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 AQP1P29972 269 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CCR7P32248 378 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ADRA1AP35348 466 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CASP3P42574 277 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 KIR2DL3P43628 341 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ESRGQ1W209 222 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 FAM209BQ5JX69 171 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 COL5A1-AS1Q5SY13 56 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 KHDRBS2Q5VWX1 349 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 B3GNTL1Q67FW5 361 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 DUPD1Q68J44 220 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 FAM53AQ6NSI3 398 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 BCL6BQ8N143 479 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 RPP25LQ8N5L8 163 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 C5orf56Q8N8D9 126 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR5A1Q8NGJ0 315 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR10K1Q8NGX5 313 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 C5orf30Q96GV9 206 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PGLYRP3Q96LB9 341 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 RAB3IPQ96QF0 476 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 SIGMAR1Q99720 223 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GGACTQ9BVM4 153 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CHST8Q9H2A9 424 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A10Q9UBX3 287 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 PDS5AQ29RF7 1337 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 XIRP2A4UGR9 3374 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 EP400Q96L91 3159 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TEX15Q9BXT5 2789 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SMCHD1A6NHR9 2005 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 FAM172BPA6NC97 362 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 C12orf77C9JDV5 145 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 M0R233 179 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 AZIN1O14977 448 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PPIHO43447 177 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 COX7A2P2O60397 106 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 WDR47O94967 919 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 IGLV2-8P01709 118 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PMP2P02689 132 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MT-ATP8P03928 68 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 EDN1P05305 212 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CSN3P07498 182 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ADRB2P07550 413 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TDGF1P13385 188 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 COX7A2P14406 83 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF823P16415 610 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GM2AP17900 193 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 YWHAQP27348 245 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PSMB9P28065 219 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SRP14P37108 136 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 PEX19P40855 299 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MRPL19P49406 292 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 LMO4P61968 165 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 RPS11P62280 158 aaKnown RBP eCLIP1.16□□□□□ -2.22
XRN1-214ENST00000498077 QRFPP83859 136 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 EWSR1Q01844 656 aaKnown RBP eCLIP1.16□□□□□ -2.22
XRN1-214ENST00000498077 RPL18Q07020 188 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 FUT5Q11128 374 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF177Q13360 481 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 GPR176Q14439 515 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 C16orf72Q14CZ0 275 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR4D1Q15615 310 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PHKG1Q16816 387 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ATP1A1-AS1Q5TC04 95 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 KCTD18Q6PI47 426 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PRSS45Q7RTY3 260 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMEM150AQ86TG1 271 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SERPINA9Q86WD7 417 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 DEFB124Q8NES8 71 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF431Q8TF32 576 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 GATAD1Q8WUU5 269 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CDKN2AIPNLQ96HQ2 116 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF317Q96PQ6 595 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 TEAD3Q99594 435 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CMSS1Q9BQ75 279 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMEM43Q9BTV4 400 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TINAGL1Q9GZM7 467 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 HES4Q9HCC6 221 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TAS2R3Q9NYW6 316 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 KCND2Q9NZV8 630 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 DMRT1Q9Y5R6 373 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SZT2Q5T011 3432 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 IGLV5-45A0A087WSX0 123 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TCRBV21S2A2A0A5A6 115 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TCRBV3S1A0A5B6 114 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 EPOPA6NHQ4 379 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 RIIAD1A6NNX1 92 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms