RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 FAM172BPA6NC97 362 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 ZNF729A6NN14 1252 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 IGLV1-47P01700 117 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 MGMTP16455 207 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 CD34P28906 385 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 RAG2P55895 527 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 LGALS4P56470 323 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 LRRC75BQ2VPJ9 315 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 SLC35E4Q6ICL7 350 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 ABHD12Q8N2K0 398 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 OR5R1Q8NH85 324 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 FOXRED1Q96CU9 486 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 MALSU1Q96EH3 234 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 MRPS24Q96EL2 167 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 KIRREL1Q96J84 757 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 BARHL1Q9BZE3 327 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 PCDHB16Q9NRJ7 776 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 CALYQ9NYX4 217 aa13.03□□□□□ -0.32
DNMT3A-215ENST00000496570 NPIPB11E5RHQ5 1161 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 SLC22A1O15245 554 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 VSIG8P0DPA2 414 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 GABRA5P31644 462 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 GLP1RP43220 463 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 QRFPP83859 136 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 DYNC1I2Q13409 638 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 TRAM1Q15629 374 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 ATAD3CQ5T2N8 411 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 GDPGP1Q6ZNW5 385 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 Q6ZSV7 163 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 SPARTQ8N0X7 666 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 MRGPRDQ8TDS7 321 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 KCNK15Q9H427 330 aa13.02□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A10PA6NDY2 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A18PA6NE21 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A16PA6NEW6 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A20PA6NIJ5 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A7PA6NKC0 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A22PA8MWA6 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A12PA8MX19 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A5PA8MXJ8 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A23PA8MXZ1 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 CRTAPO75718 401 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 IL1AP01583 271 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A15PP0C7V4 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A13PP0C7W8 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A14PP0C7W9 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM90A24PP0C7X0 464 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 PSMA1P25786 263 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 SSTR5P35346 364 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 RAB13P51153 203 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 UNC119Q13432 240 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 SSX2Q16385 188 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 LY6EQ16553 131 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 MINOS1Q5TGZ0 78 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 OR52W1Q6IF63 320 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 OR10K2Q6IF99 312 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 CCBE1Q6UXH8 406 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 ZNF497Q6ZNH5 498 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 GAPTQ8N292 157 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 LINC01006Q8NI28 216 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM46BQ96A09 425 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 SELENOIQ9C0D9 397 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 Q9H521 79 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 NDUFB11Q9NX14 153 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 GHRLQ9UBU3 117 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 MINOS1-NBL1R4GNA1 71 aa13.01□□□□□ -0.33
DNMT3A-215ENST00000496570 SHISA3A0PJX4 238 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 BTBD17A6NE02 478 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 POM121CA8CG34 1229 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 LY6LH3BQJ8 138 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 C15orf65H3BRN8 121 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 CHST1O43916 411 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 TSPAN9O75954 239 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 MT-ND4P03905 459 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 CRYBA1P05813 215 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 KRTAP10-3P60369 221 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 PLA1AQ53H76 456 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 RTN4RL2Q86UN3 420 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 ZNF565Q8N9K5 539 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 OR4F5Q8NH21 305 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
DNMT3A-215ENST00000496570 C16orf95Q9H693 158 aa13□□□□□ -0.33
DNMT3A-215ENST00000496570 TMEM30CPA0ZSE6 113 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 TMEM14DPA8MWL7 114 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 UBBP0CG47 229 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 HTR2CP28335 458 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 DYNLT3P51808 116 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 RAB12Q6IQ22 244 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 RFESDQ8TAC1 157 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 WFDC12Q8WWY7 111 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 BEX1Q9HBH7 125 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
DNMT3A-215ENST00000496570 IDI2-AS1Q9NZ38 188 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms