RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 LINC00574Q9H8X3 128 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 IL36GQ9NZH8 169 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 AMMECR1Q9Y4X0 333 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 HSPE1-MOB4S4R3N1 261 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 NPIPB11E5RHQ5 1161 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 XPNPEP2O43895 674 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 ZNF780AO75290 641 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-214ENST00000496043 GPX5O75715 221 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 OR2F2O95006 317 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 IL1AP01583 271 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 FAM106CPP0CH98 169 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 PAX5Q02548 391 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 ST3GAL4Q11206 333 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 RIPK1Q13546 671 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 GPR176Q14439 515 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 Q499Y3 187 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 NHLRC3Q5JS37 347 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 RSBN1Q5VWQ0 802 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-214ENST00000496043 DMKNQ6E0U4 476 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-214ENST00000496043 THNSL2Q86YJ6 484 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 PLPPR1Q8TBJ4 325 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 MRGPRDQ8TDS7 321 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 RPEQ96AT9 228 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 R3HDM4Q96D70 268 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 IFT22Q9H7X7 185 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 CKLFQ9UBR5 152 aa10.19□□□□□ -0.78
PTPRF-214ENST00000496043 VWFP04275 2813 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 TRBV5-5A0A0J9YX44 114 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 EFCAB10A6NFE3 127 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 G3V4G9 280 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 M0QZK8 103 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 OR7C1O76099 320 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-214ENST00000496043 LALBAP00709 142 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 GTF2F2P13984 249 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 IGFBP3P17936 291 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-214ENST00000496043 RBM11P57052 281 aaKnown RBP10.18□□□□□ -0.78
PTPRF-214ENST00000496043 TAS2R43P59537 309 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 CD83Q01151 205 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 GABPB1Q06547 395 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-214ENST00000496043 LTC4SQ16873 150 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 ABCA11PQ4W5N1 156 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 YIF1BQ5BJH7 314 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 UTF1Q5T230 341 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 TOMM40LQ969M1 308 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 ORAI1Q96D31 301 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 ZNF184Q99676 751 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-214ENST00000496043 PSG11Q9UQ72 335 aa10.18□□□□□ -0.78
PTPRF-214ENST00000496043 TRAV39A0A0B4J263 110 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A18PA6NE21 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A16PA6NEW6 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A20PA6NIJ5 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A9PA6NNJ1 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A12PA8MX19 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A5PA8MXJ8 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 GEMIN2O14893 280 aaKnown RBP10.17□□□□□ -0.78
PTPRF-214ENST00000496043 IGHV3-7P01780 117 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 LPLP06858 475 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A15PP0C7V4 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A13PP0C7W8 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A14PP0C7W9 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 FAM90A24PP0C7X0 464 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 SERPINA2P20848 420 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 CAPGP40121 348 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 RPS11P62280 158 aaKnown RBP eCLIP10.17□□□□□ -0.78
PTPRF-214ENST00000496043 MADCAM1Q13477 382 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 RCN1Q15293 331 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 MPV17LQ2QL34 196 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 BEAN1Q3B7T3 259 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 TMEM95Q3KNT9 176 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 SLC22A6Q4U2R8 563 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 ATAD3CQ5T2N8 411 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 SAMD5Q5TGI4 173 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 CDH26Q8IXH8 852 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 C8orf59Q8N0T1 100 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-214ENST00000496043 STX19Q8N4C7 294 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 ZFP41Q8N8Y5 198 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 ZNF485Q8NCK3 441 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 OR13C5Q8NGS8 318 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 LEAP2Q969E1 77 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 PLCXD1Q9NUJ7 323 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 CNOT2Q9NZN8 540 aaKnown RBP10.17□□□□□ -0.78
PTPRF-214ENST00000496043 NOTCH1P46531 2555 aa10.17□□□□□ -0.78
PTPRF-214ENST00000496043 A0A1W2PPK0 400 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 TCRBV4S1A1TA0A5B7 111 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 TMEM30CPA0ZSE6 113 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 ADARB2-AS1A8MUL3 147 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 RAB7AP51149 207 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 C9orf152Q5JTZ5 239 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 OR52M1Q8NGK5 317 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 OR10X1Q8NGY0 326 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 NEK7Q8TDX7 302 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 ARL11Q969Q4 196 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 MRPS24Q96EL2 167 aaKnown RBP10.16□□□□□ -0.78
PTPRF-214ENST00000496043 PGLYRP3Q96LB9 341 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 SPACA1Q9HBV2 294 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 ZNF581Q9P0T4 197 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 PSORS1C1Q9UIG5 152 aa10.16□□□□□ -0.78
PTPRF-214ENST00000496043 TRAV8-7A0A075B6U6 113 aa10.15□□□□□ -0.78
PTPRF-214ENST00000496043 TRBV5-7A0A0A0MS05 114 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms