RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 OR13D1Q8NGV5 346 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 OR5AK2Q8NH90 309 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 APH1BQ8WW43 257 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 STMN2Q93045 179 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 SPSB1Q96BD6 273 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 ZNF714Q96N38 554 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 PDCD1LG2Q9BQ51 273 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 ZNF649Q9BS31 505 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 THAP7Q9BT49 309 aaPredicted RBP6.53□□□□□ -1.36
RIF1-211ENST00000494333 COMMD4Q9H0A8 199 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 SEBOXQ9HB31 216 aaPredicted RBP6.53□□□□□ -1.36
RIF1-211ENST00000494333 NEK6Q9HC98 313 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 HMG20AQ9NP66 347 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 INPP5EQ9NRR6 644 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 SMPD3Q9NY59 655 aaPredicted RBP6.53□□□□□ -1.36
RIF1-211ENST00000494333 GSTK1Q9Y2Q3 226 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 FAM90A8PA6NJQ4 464 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 TMEM212A6NML5 194 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 SIRPB1O00241 398 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 TIMM23O14925 209 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 SPRY2O43597 315 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 KDM4BO94953 1096 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 OR2H2O95918 312 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 MT-ND2P03891 347 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 HCKP08631 526 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 RPSAP08865 295 aaKnown RBP6.52□□□□□ -1.37
RIF1-211ENST00000494333 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 IGHV1-8P0DP01 117 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 TMEM225BP0DP42 221 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 GABRA5P31644 462 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 RAB13P51153 203 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 GTF2A1P52655 376 aaPredicted RBP6.52□□□□□ -1.37
RIF1-211ENST00000494333 SUMO2P61956 95 aaKnown RBP6.52□□□□□ -1.37
RIF1-211ENST00000494333 SCN1BQ07699 218 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 MRPL28Q13084 256 aaKnown RBP6.52□□□□□ -1.37
RIF1-211ENST00000494333 DYNC1I2Q13409 638 aaKnown RBP6.52□□□□□ -1.37
RIF1-211ENST00000494333 FHL3Q13643 280 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 ZNF146Q15072 292 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 FAM189A2Q15884 450 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 SSX2Q16385 188 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 AANATQ16613 207 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 LRRC36Q1X8D7 754 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 SPIN3Q5JUX0 258 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 ASPHD2Q6ICH7 369 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 DYNAPQ8N1N2 210 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 PIFOQ8TCI5 191 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 MALSU1Q96EH3 234 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 EXOSC4Q9NPD3 245 aaKnown RBP6.52□□□□□ -1.37
RIF1-211ENST00000494333 DHDHQ9UQ10 334 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 PCDHGB5Q9Y5G0 923 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 LINC00312Q9Y6C7 94 aa6.52□□□□□ -1.37
RIF1-211ENST00000494333 A0A0G2JK05 382 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 M0QZ24 198 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 DEGS1O15121 323 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 SULT1B1O43704 296 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 PROP1O75360 226 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 WBP4O75554 376 aaKnown RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 MMP23AO75900 390 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 JTBO76095 146 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 CLIC3O95833 236 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 RBP4P02753 201 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 LIMS3P0CW19 117 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 LIMS4P0CW20 117 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 ZNF44P15621 663 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 LMO1P25800 156 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 DCKP27707 260 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 ERP29P30040 261 aaKnown RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 KIR2DS4P43632 304 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 OR3A1P47881 315 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 GLIPR1P48060 266 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 SOX2P48431 317 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 ETV1P50549 477 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 AESQ08117 197 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 KISS1Q15726 138 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 ZSCAN26Q16670 478 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 LPCAT4Q643R3 524 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 ZNF626Q68DY1 528 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 TCF23Q7RTU1 214 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 TRAPPC6BQ86SZ2 158 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 SATL1Q86VE3 508 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 CCDC28AQ8IWP9 274 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 SAXO1Q8IYX7 474 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 PARP16Q8N5Y8 322 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 CNIH3Q8TBE1 160 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 TSEN15Q8WW01 171 aaKnown RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 CYGBQ8WWM9 190 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 RDH12Q96NR8 316 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 NKX3-1Q99801 234 aaPredicted RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 RAB18Q9NP72 206 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 FGF20Q9NP95 211 aaPredicted RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 ABCB10Q9NRK6 738 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 NKX1-2Q9UD57 310 aaPredicted RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 SIGLEC9Q9Y336 463 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 TBL2Q9Y4P3 447 aaKnown RBP6.51□□□□□ -1.37
RIF1-211ENST00000494333 COX11Q9Y6N1 276 aa6.51□□□□□ -1.37
RIF1-211ENST00000494333 TRGV10A0A0A0MS01 117 aa6.5□□□□□ -1.37
RIF1-211ENST00000494333 IGHV2-26A0A0B4J1V2 119 aa6.5□□□□□ -1.37
RIF1-211ENST00000494333 FUOMA2VDF0 154 aa6.5□□□□□ -1.37
RIF1-211ENST00000494333 VGLL3A8MV65 326 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms