RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TMED9Q9BVK6 235 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 SEBOXQ9HB31 216 aaPredicted RBP8.41□□□□□ -1.06
TTC28-207ENST00000490475 TMEM138Q9NPI0 162 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 C19orf12Q9NSK7 152 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 GLS2Q9UI32 602 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 GSTK1Q9Y2Q3 226 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 TMEM82A0PJX8 343 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 FAM90A8PA6NJQ4 464 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 C17orf98A8MV24 154 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 BOLA2-SMG1P6H3BVE0 249 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 GABRPO00591 440 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 AIREO43918 545 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 ZNF737O75373 536 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 PEX14O75381 377 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 CDRT1O95170 752 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 TSPAN15O95858 294 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 HAND1O96004 215 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 MAS1P04201 325 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 ZNF728P0DKX0 622 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 BDKRB2P30411 391 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 ZNF93P35789 620 aaPredicted RBP8.4□□□□□ -1.06
TTC28-207ENST00000490475 PTGFRP43088 359 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 DYNLT3P51808 116 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 ARHGDIBP52566 201 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 DLX1P56177 255 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 PPP3R1P63098 170 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 SCN1BQ07699 218 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 TPBGQ13641 420 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 FAM27D1Q5T7N8 215 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 DDI2Q5TDH0 399 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 CEACAM19Q7Z692 300 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 SAXO1Q8IYX7 474 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 PNKDQ8N490 385 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 MS4A15Q8N5U1 240 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 ASCC1Q8N9N2 400 aaKnown RBP8.4□□□□□ -1.06
TTC28-207ENST00000490475 OR10K1Q8NGX5 313 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 PPP1R35Q8TAP8 253 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 TNFAIP8L1Q8WVP5 186 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 CFHR4Q92496 578 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 DCSTAMPQ9H295 470 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 PPIL3Q9H2H8 161 aaKnown RBP8.4□□□□□ -1.06
TTC28-207ENST00000490475 CKLFQ9UBR5 152 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 ING4Q9UNL4 249 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 DSCAML1Q8TD84 2053 aa8.4□□□□□ -1.06
TTC28-207ENST00000490475 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 hADV38S2A0JD32 116 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 MEX3AA1L020 520 aaKnown RBP8.39□□□□□ -1.07
TTC28-207ENST00000490475 SH2D1BO14796 132 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 PSPNO60542 156 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 APOA1P02647 267 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 S100A1P23297 94 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 OR3A4PP47883 348 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 EIF2B2P49770 351 aaKnown RBP8.39□□□□□ -1.07
TTC28-207ENST00000490475 GPR50Q13585 617 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 ZNF146Q15072 292 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 LY6EQ16553 131 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 MINOS1Q5TGZ0 78 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 ASCL4Q6XD76 172 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 OR8H2Q8N162 312 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 KLHDC1Q8N7A1 406 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 OR11H6Q8NGC7 330 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 UFD1Q92890 307 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 AKR1E2Q96JD6 320 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 SNX22Q96L94 193 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 OR4F4Q96R69 305 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 MGLLQ99685 303 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 CHST6Q9GZX3 395 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 ISYNA1Q9NPH2 558 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 TCF19Q9Y242 345 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 MINOS1-NBL1R4GNA1 71 aa8.39□□□□□ -1.07
TTC28-207ENST00000490475 NOTCH3Q9UM47 2321 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 SIRPB1O00241 398 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 FBXO24O75426 580 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 HTR3BO95264 441 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 OR2H2O95918 312 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 ARG1P05089 322 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 TRAPPC2P0DI81 140 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 TRAPPC2BP0DI82 140 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 FSTP19883 344 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 GABRR1P24046 479 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 COX7A1P24310 79 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 EDDM3BP56851 147 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 VBP1P61758 197 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 RPS25P62851 125 aaKnown RBP8.38□□□□□ -1.07
TTC28-207ENST00000490475 RSU1Q15404 277 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 SPIN3Q5JUX0 258 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 ZNF626Q68DY1 528 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 OR52W1Q6IF63 320 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 Q6P435 159 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 TMEM91Q6ZNR0 172 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 C16orf82Q7Z2V1 217 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 NDUFA11Q86Y39 141 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 LYSMD2Q8IV50 215 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 CADM3Q8N126 398 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 Q8N2B8 174 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 JAGN1Q8N5M9 183 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 TPRX1Q8N7U7 411 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms