RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 KBTBD11-OT1A0A1B0GTJ5 212 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 ACOD1A6NK06 481 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF729A6NN14 1252 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 BBIP1A8MTZ0 92 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 FAM25EA8MYX2 175 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 RGS11O94810 467 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 OR2H2O95918 312 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 TTRP02766 147 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 CGB3P0DN86 165 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 CGB7P0DN87 165 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 SLC2A2P11168 524 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 BCL3P20749 454 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 IFNGR2P38484 337 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 HCCSP53701 268 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 SMIM11AP58511 58 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF146Q15072 292 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 LTC4SQ16873 150 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 TMEM104Q8NE00 496 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 OR9Q2Q8NGE9 314 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 RP9Q8TA86 221 aaKnown RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 OTULINQ96BN8 352 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 PPIL3Q9H2H8 161 aaKnown RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 ARMC1Q9NVT9 282 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 GID8Q9NWU2 228 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF107Q9UII5 783 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 BLOC1S6Q9UL45 172 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 MRPS28Q9Y2Q9 187 aaKnown RBP6.96□□□□□ -1.3
SSBP1-212ENST00000489378 V9GYS6 101 aa6.96□□□□□ -1.3
SSBP1-212ENST00000489378 SHISA3A0PJX4 238 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 FUOMA2VDF0 154 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 IZUMO1RA6ND01 250 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 RIIAD1A6NNX1 92 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 PRR32B1ATL7 298 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 H3BS24 57 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 NME4O00746 187 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 ATP6V0E1O15342 81 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 MOSP00540 346 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 GAPDHP04406 335 aaKnown RBP6.95□□□□□ -1.3
SSBP1-212ENST00000489378 HSPB1P04792 205 aaKnown RBP6.95□□□□□ -1.3
SSBP1-212ENST00000489378 PRKACAP17612 351 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 CDC42P60953 191 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 KRBOX4Q5JUW0 171 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 IL34Q6ZMJ4 242 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 FAM58AQ8N1B3 248 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 MFSD4AQ8N468 514 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 OR10X1Q8NGY0 326 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 OR14K1Q8NGZ2 314 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 GIMAP1Q8WWP7 306 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 TMEM106AQ96A25 262 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 TLCD1Q96CP7 247 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 OR51V1Q9H2C8 321 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 SIGLEC8Q9NYZ4 499 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 OR6C3Q9NZP0 311 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 NUFIP1Q9UHK0 495 aaKnown RBP6.95□□□□□ -1.3
SSBP1-212ENST00000489378 KLK5Q9Y337 293 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-212ENST00000489378 V9GYQ6 96 aa6.95□□□□□ -1.3
SSBP1-212ENST00000489378 TRAV41A0A0B4J266 112 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 TRBV2A0A0J9YWF9 115 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 A0A1B0GTI1 187 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 H0Y980 276 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 SOX15O60248 233 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 CNIH1O95406 144 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 SOX14O95416 240 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 IFNGP01579 166 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF3P17036 446 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 ALOX5APP20292 161 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 RRM2P31350 389 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 GLP1RP43220 463 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 ATXN7L3Q14CW9 347 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-212ENST00000489378 UBE2V2Q15819 145 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 RASSF6Q6ZTQ3 369 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 CROCCP2Q86T23 111 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 DEFB125Q8N687 156 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 MINDY2Q8NBR6 621 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 OR2T33Q8NG76 320 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 RFESDQ8TAC1 157 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 FLYWCH2Q96CP2 140 aaKnown RBP6.94□□□□□ -1.3
SSBP1-212ENST00000489378 RCN3Q96D15 328 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 BTBD10Q9BSF8 475 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 OSBPL10Q9BXB5 764 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 WFDC10AQ9H1F0 79 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 ZCCHC4Q9H5U6 513 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 CMC2Q9NRP2 79 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 CALYQ9NYX4 217 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 IDI2-AS1Q9NZ38 188 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
SSBP1-212ENST00000489378 A0A0G2JND7 137 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 A0A0J9YWU9 116 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SH2D1BO14796 132 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SEMG1P04279 462 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 CD1BP29016 333 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SCN1BQ07699 218 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SF3A3Q12874 501 aaKnown RBP eCLIP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 BNIP1Q12981 228 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 MRPL28Q13084 256 aaKnown RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SPIN3Q5JUX0 258 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SAMD4BQ5PRF9 694 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms