RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ABCA11PQ4W5N1 156 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 PAN3Q58A45 887 aaKnown RBP7.22□□□□□ -1.25
VTI1A-207ENST00000489357 SPIN3Q5JUX0 258 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 RTN4RL2Q86UN3 420 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 MDP1Q86V88 176 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 POC1AQ8NBT0 407 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 RBPMSQ93062 196 aaKnown RBP7.22□□□□□ -1.25
VTI1A-207ENST00000489357 ABHD14BQ96IU4 210 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 MICU1Q9BPX6 476 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 SHARPINQ9H0F6 387 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 NAA60Q9H7X0 242 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 CDH20Q9HBT6 801 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 Q9N2K0 584 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 PLSCR4Q9NRQ2 329 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 RASL12Q9NYN1 266 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 MBD2Q9UBB5 411 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 PRSS50Q9UI38 385 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 GPR160Q9UJ42 338 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 FBXO9Q9UK97 447 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-207ENST00000489357 PCDHB10Q9UN67 800 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 TMED3Q9Y3Q3 217 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 ATP23Q9Y6H3 246 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
VTI1A-207ENST00000489357 DOPEY2Q9Y3R5 2298 aa7.21□□□□□ -1.25
VTI1A-207ENST00000489357 IGKV1D-8A0A087WSZ0 117 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 C13orf42A0A1B0GVH6 325 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 ZNF503-AS2A6NEH8 195 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 MFSD2BA6NFX1 497 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 IQCF6A8MYZ5 107 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 CCSO14618 274 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 IGKV3-15P01624 115 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 HOXD4P09016 255 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-207ENST00000489357 GLRA1P23415 457 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 S100GP29377 79 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 WNT5AP41221 380 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 UQCRFS1P47985 274 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 GPM6AP51674 278 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 PIGPP57054 158 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 PMP22Q01453 160 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 MZT1Q08AG7 82 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 SLC9A3R2Q15599 337 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 AANATQ16613 207 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 ANKRD55Q3KP44 614 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 KRTCAP3Q53RY4 240 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 TOR2AQ5JU69 321 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 SLC22A25Q6T423 547 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 FIP1L1Q6UN15 594 aaKnown RBP7.21□□□□□ -1.26
VTI1A-207ENST00000489357 UQCC3Q6UW78 93 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 LGI3Q8N145 548 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 SPERTQ8NA61 448 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 ST6GALNAC3Q8NDV1 305 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 LILRB1Q8NHL6 650 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-207ENST00000489357 RTN4IP1Q8WWV3 396 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-207ENST00000489357 IL22RA2Q969J5 263 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 SEC22AQ96IW7 307 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 PSMG3-AS1Q96PY0 264 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 OR51I2Q9H344 312 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 PLEKHA2Q9HB19 425 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 SLC2A9Q9NRM0 540 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 RDH8Q9NYR8 311 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 GLS2Q9UI32 602 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 ZNF835Q9Y2P0 537 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 AMDHD2Q9Y303 409 aa7.21□□□□□ -1.26
VTI1A-207ENST00000489357 USP9YO00507 2555 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-207ENST00000489357 ICE1Q9Y2F5 2266 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 A0A1B0GWJ7 208 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MBD3L4A6NDZ8 208 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MBD3L3A6NE82 208 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MBD3L5A6NJ08 208 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 A8MXK9 166 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 TRDCB7Z8K6 153 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 EEF1E1-BLOC1S5C9J1V9 151 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 F5H0A9 414 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 DEGS1O15121 323 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SMPD2O60906 423 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SPDEFO95238 335 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 CDS2O95674 445 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 PLATP00750 562 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 KNG1P01042 644 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 NGFP01138 241 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 PPYP01298 95 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 GAPDHP04406 335 aaKnown RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 BCL3P20749 454 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 ZP3P21754 424 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 IGHV1-2P23083 117 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 FCGR2CP31995 323 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 FOXG1P55316 489 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 PPP1CBP62140 327 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SRSF1Q07955 248 aaKnown RBP eCLIP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SNTB1Q13884 538 aaKnown RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 DAZAP2Q15038 168 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 LRRC37A5PQ49AS3 106 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 HIKESHIQ53FT3 197 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 C9orf135Q5VTT2 229 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 ZNF880Q6PDB4 577 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 ALKAL2Q6UX46 152 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 LDLRAD3Q86YD5 345 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MED12LQ86YW9 2145 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 BAP18Q8IXM2 172 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms