RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PDCD6O75340 191 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 MMP23AO75900 390 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 ARSBP15848 533 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 FUT3P21217 361 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 CHATP28329 748 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 SAA4P35542 130 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 CLDN12P56749 244 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 SRSF2Q01130 221 aaKnown RBP15.19■□□□□ 0.02
PTCD3-217ENST00000488801 KRTAP24-1Q3LI83 254 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 MIDNQ504T8 468 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 ATAD3CQ5T2N8 411 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 RAB12Q6IQ22 244 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 ZNF782Q6ZMW2 699 aaPredicted RBP15.19■□□□□ 0.02
PTCD3-217ENST00000488801 ZNF497Q6ZNH5 498 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 GDPGP1Q6ZNW5 385 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 TPRA1Q86W33 373 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 PNKDQ8N490 385 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 OR11H6Q8NGC7 330 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 OR51D1Q8NGF3 324 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 ZFAND2BQ8WV99 257 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 FAM3DQ96BQ1 224 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 CHCHD6Q9BRQ6 235 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 CENPOQ9BU64 300 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 GAL3ST2Q9H3Q3 398 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 HEXA-AS1Q9H8Q6 139 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 SESN1Q9Y6P5 492 aa15.19■□□□□ 0.02
PTCD3-217ENST00000488801 A0A087X0M5 115 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 A0A0U1RQK1 487 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 A0A1B0GX30 115 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 DNAJC9-AS1A6NH13 148 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 NPIPB11E5RHQ5 1161 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 CD34P28906 385 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 GDNFP39905 211 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 HES5Q5TA89 166 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 ZNF626Q68DY1 528 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 Q6YL49 198 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 TRAPPC6BQ86SZ2 158 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 OR13F1Q8NGS4 319 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 KCTD7Q96MP8 289 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 JMJD8Q96S16 334 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 RNF167Q9H6Y7 350 aa15.18■□□□□ 0.02
PTCD3-217ENST00000488801 MEIKINA0A087WXM9 373 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 TMEM272A0A1B0GTI8 110 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 KBTBD11-OT1A0A1B0GTJ5 212 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 TMEM30CPA0ZSE6 113 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 NOTOA8MTQ0 251 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 H3BUI4 141 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 CA11O75493 328 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 GLP1RP43220 463 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 RANBP1P43487 201 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 PLA2G7Q13093 441 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 RBM39Q14498 530 aaKnown RBP15.17■□□□□ 0.02
PTCD3-217ENST00000488801 TIMM50Q3ZCQ8 353 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 BRICD5Q6PL45 260 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 DYRK2Q92630 601 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 TMEM133Q9H2Q1 129 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 ZMAT3Q9HA38 289 aaKnown RBP15.17■□□□□ 0.02
PTCD3-217ENST00000488801 ZNRD1Q9P1U0 126 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 PEX16Q9Y5Y5 336 aa15.17■□□□□ 0.02
PTCD3-217ENST00000488801 MCRIP1C9JLW8 97 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 C15orf65H3BRN8 121 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 IL1AP01583 271 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 MT-ND4P03905 459 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 MELTFP08582 738 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 CDK2P24941 298 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 SDC2P34741 201 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 UBA52P62987 128 aaKnown RBP15.16■□□□□ 0.02
PTCD3-217ENST00000488801 C2orf76Q3KRA6 126 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 LDLRAD2Q5SZI1 272 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 PRAMEF5Q5TYX0 476 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 BAIAP2L2Q6UXY1 529 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 C17orf50Q8WW18 174 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 KIRREL1Q96J84 757 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 SULT4A1Q9BR01 284 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 LIN7BQ9HAP6 207 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 ING3Q9NXR8 418 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 CALYQ9NYX4 217 aa15.16■□□□□ 0.02
PTCD3-217ENST00000488801 IGHV2-26A0A0B4J1V2 119 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 LOC100506127A0A0U1RQW1 187 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 COX7A1P24310 79 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 SFXN4Q6P4A7 337 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 RTN4RL2Q86UN3 420 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 TMEM86BQ8N661 226 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 OR13D1Q8NGV5 346 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 MRGPRDQ8TDS7 321 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 PTX4Q96A99 478 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 MDFIQ99750 246 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 URM1Q9BTM9 101 aaKnown RBP15.15■□□□□ 0.02
PTCD3-217ENST00000488801 MRPS26Q9BYN8 205 aaKnown RBP15.15■□□□□ 0.02
PTCD3-217ENST00000488801 MBNL3Q9NUK0 354 aaKnown RBP15.15■□□□□ 0.02
PTCD3-217ENST00000488801 ETAA1Q9NY74 926 aa15.15■□□□□ 0.02
PTCD3-217ENST00000488801 TENM1Q9UKZ4 2725 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 A0A0B4J203 849 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 A0A1W2PRD5 423 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 A0A1W2PRF3 423 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 A0A1W2PRM7 423 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 MEIOCA2RUB1 952 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 SMIM30A4D0T7 59 aa15.14■□□□□ 0.01
PTCD3-217ENST00000488801 RNASE1P07998 156 aaKnown RBP15.14■□□□□ 0.01
PTCD3-217ENST00000488801 FBP1P09467 338 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms